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PDBsum entry 8frd
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Tunnel analysis for: 8frd calculated with  MOLE 2.0
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PDB id
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8frd
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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0 tunnels,
coloured by tunnel radius |
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8 tunnels,
coloured by
tunnel radius
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8 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.27 |
2.94 |
26.4 |
-1.50 |
0.23 |
10.3 |
70 |
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0 |
4 |
3 |
3 |
7 |
1 |
0 |
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NAG 1 C
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2 |
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1.27 |
2.94 |
32.5 |
-1.96 |
0.30 |
19.0 |
73 |
2 |
4 |
3 |
3 |
6 |
0 |
0 |
NAG 1 C NAG 1 D
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3 |
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1.27 |
2.94 |
34.8 |
-2.17 |
-0.06 |
22.1 |
72 |
2 |
6 |
2 |
3 |
6 |
0 |
0 |
NAG 1 C
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4 |
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1.27 |
2.93 |
39.4 |
-0.51 |
0.11 |
11.4 |
75 |
1 |
3 |
3 |
4 |
7 |
0 |
0 |
NAG 1 C
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5 |
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1.27 |
2.98 |
47.2 |
-0.66 |
0.17 |
10.4 |
75 |
3 |
3 |
5 |
4 |
7 |
1 |
1 |
NAG 1 C
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6 |
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1.31 |
2.72 |
19.6 |
-1.61 |
0.43 |
15.9 |
69 |
0 |
4 |
2 |
3 |
6 |
0 |
0 |
NAG 1 F NAG 2 F NAG 2 G
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7 |
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1.31 |
2.72 |
25.5 |
-0.82 |
0.49 |
14.5 |
69 |
0 |
3 |
1 |
4 |
6 |
0 |
0 |
NAG 1 F NAG 2 F
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8 |
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1.31 |
2.71 |
26.1 |
-1.56 |
0.37 |
17.8 |
68 |
1 |
5 |
1 |
3 |
7 |
0 |
0 |
NAG 1 F NAG 2 F NAG 1 G NAG 2 G
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program