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PDBsum entry 8fmz

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 8fmz calculated with MOLE 2.0 PDB id
8fmz
Pores calculated on whole structure Pores calculated excluding ligands

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10 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.52 1.52 25.5 -1.21 -0.34 16.3 88 4 1 4 2 3 0 0  
2 1.28 1.42 28.7 -1.08 -0.25 13.1 87 3 1 4 3 3 0 0  
3 2.25 2.27 34.5 -1.57 -0.25 23.8 83 7 0 2 2 2 0 0  
4 1.50 1.51 40.3 -1.15 -0.32 15.8 87 4 1 5 5 5 0 0  
5 1.50 1.85 47.0 -0.75 -0.26 16.2 92 7 2 4 6 0 0 0  
6 1.50 1.84 77.6 -1.02 -0.25 18.9 89 12 2 5 7 2 0 0  
7 1.73 1.85 80.0 -1.71 -0.35 20.1 86 10 1 7 5 4 1 0  
8 1.50 1.50 91.0 -1.58 -0.34 19.4 86 13 2 8 4 4 1 0  
9 1.50 1.56 92.4 -1.16 -0.32 16.8 91 10 3 9 9 2 1 0  
10 1.49 1.85 102.1 -1.30 -0.37 17.4 90 13 4 10 8 3 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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