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PDBsum entry 8fe3

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 8fe3 calculated with MOLE 2.0 PDB id
8fe3
Pores calculated on whole structure Pores calculated excluding ligands

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22 pores, coloured by radius 22 pores, coloured by radius 22 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.35 1.35 30.0 1.81 0.45 2.5 80 1 0 0 8 2 1 1  
2 1.31 1.35 49.4 0.47 -0.02 10.4 82 3 4 1 12 2 1 0  
3 1.31 1.68 60.8 -0.18 -0.43 6.4 90 1 1 4 6 1 2 0  
4 1.93 2.51 65.8 -0.54 -0.27 14.7 81 3 4 5 7 3 0 0  
5 1.87 2.07 72.9 0.14 0.18 8.7 70 6 1 1 10 5 1 0  
6 1.94 2.51 97.2 -0.99 -0.48 17.2 85 6 7 6 7 2 0 0  
7 1.27 1.37 113.8 0.64 0.08 10.2 82 6 6 2 28 4 2 0  
8 1.28 1.32 117.1 -0.53 -0.31 14.5 83 8 6 6 15 2 3 1  
9 1.41 1.73 129.9 0.06 -0.36 6.2 85 3 2 9 12 0 2 2  
10 1.70 2.96 131.5 0.93 0.33 5.0 72 3 3 3 24 5 4 2  
11 1.80 1.92 134.9 -0.15 -0.05 11.9 80 6 6 2 16 4 2 1  
12 1.78 1.88 141.1 -0.31 -0.19 10.6 80 7 5 3 17 3 2 0  
13 1.95 2.13 146.8 -0.08 -0.05 10.8 79 6 7 3 18 4 3 1  
14 1.77 1.90 150.0 -0.23 -0.17 9.6 79 7 5 4 18 3 3 0  
15 1.55 1.94 153.3 0.98 0.29 5.8 73 4 4 2 30 6 4 2  
16 1.36 1.36 156.1 0.77 0.20 5.8 73 5 4 2 26 6 5 3  
17 1.30 1.32 155.8 -0.18 -0.32 8.3 83 8 4 10 17 3 4 0  
18 1.60 1.95 194.7 0.62 0.13 7.1 76 7 5 3 27 5 5 2  
19 1.21 1.31 198.0 -0.28 -0.22 11.5 81 11 9 9 21 4 2 1  
20 1.29 1.68 206.2 -0.48 -0.45 7.7 85 7 5 11 14 3 4 0  
21 1.55 1.74 211.8 -1.13 -0.52 15.2 83 15 10 12 11 2 4 2  
22 1.18 1.55 272.4 -0.22 -0.31 4.5 83 2 4 19 23 9 5 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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