PDBsum entry 8fa2

Viral protein

PDB id: 8fa2

Contents

Protein chains

71 a.a.

43 a.a.

PDB id:

8fa2

Name:

Viral protein

Title:

Cryo-em structure of the sars-cov-2 omicron hr1-42g complex

Structure:

Scaffolded spike protein s2' hr1. Chain: a, b, c. Engineered: yes. Spike protein s2' 42g. Chain: d, e, f. Engineered: yes

Source:

Nostoc punctiforme pcc 73102, severe acute respiratory syndrome coronavirus 2. 2019-ncov, sars-cov-2. Organism_taxid: 63737, 2697049. Gene: npun_r5799, s, 2. Expressed in: escherichia coli. Expression_system_taxid: 562. Severe acute respiratory syndrome coronavirus 2.

Authors:

K.Yang,A.T.Brunger

Key ref:

K.Yang et al. (2023). Structure-Based design of a sars-Cov-2 omicron-Specif inhibitor. Proc natl acad sci usa, 120, . PubMed id: 36940324

Date:

25-Nov-22 Release date: 29-Mar-23

Protein chains

B2J981  (B2J981_NOSP7) -  Ferritin, Dps family protein from Nostoc punctiforme (strain ATCC 29133 / PCC 73102)

Seq: 184 a.a.

Struc: 71 a.a.*

Protein chains

P0DTC2  (SPIKE_SARS2) -  Spike glycoprotein from Severe acute respiratory syndrome coronavirus 2

Seq: 1273 a.a.

Struc: 71 a.a.*

Protein chains

P0DTC2  (SPIKE_SARS2) -  Spike glycoprotein from Severe acute respiratory syndrome coronavirus 2

Seq: 1273 a.a.

Struc: 43 a.a.*

* PDB and UniProt seqs differ at 60 residue positions (black crosses)