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PDBsum entry 8f8s

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Pore analysis for: 8f8s calculated with MOLE 2.0 PDB id
8f8s
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.52 3.37 30.9 -2.39 -0.45 27.9 84 4 3 3 2 1 0 0  
2 2.12 3.14 38.1 -2.59 -0.39 27.7 76 6 6 2 2 2 1 0  
3 2.26 3.37 44.7 -0.87 -0.40 15.0 93 3 3 6 6 0 0 0  HIC 73 C
4 1.52 3.37 45.4 -2.42 -0.30 30.8 76 8 5 1 2 2 1 0  HIC 73 D
5 1.90 1.99 46.8 -1.05 -0.26 17.7 83 5 4 3 7 2 1 0  HIC 73 C
6 1.91 2.00 46.8 -2.25 -0.42 28.0 82 7 5 4 2 2 1 0  HIC 73 D
7 1.47 2.92 48.2 -2.24 -0.37 28.0 82 5 3 2 3 2 0 0  HIC 73 C ADP 401 C
8 1.49 2.93 52.3 -2.48 -0.34 29.2 78 7 5 2 2 3 1 0  HIC 73 F
9 1.48 3.04 55.0 -1.61 -0.35 21.7 85 5 7 3 5 1 1 0  HIC 73 D
10 2.02 2.05 59.4 -1.65 -0.33 19.0 79 5 4 3 5 4 0 0  HIC 73 B
11 1.94 1.94 59.7 -1.33 -0.37 18.6 86 5 6 4 6 2 0 0  HIC 73 B HIC 73 C
12 1.47 2.94 62.3 -1.49 -0.42 22.7 86 6 7 2 6 1 0 0  HIC 73 B ADP 401 C
13 1.28 1.30 64.3 -1.22 -0.21 20.7 82 9 6 3 9 2 0 0  ADP 401 A MG 402 A
14 1.17 1.19 69.5 -1.15 -0.27 19.9 82 7 6 2 8 2 2 0  HIC 73 F
15 1.95 1.94 71.4 -1.70 -0.44 21.8 84 6 9 5 6 2 1 0  HIC 73 B HIC 73 C
16 1.22 1.30 74.8 -1.37 -0.24 22.8 81 10 7 3 10 2 1 0  ADP 401 A MG 402 A
17 1.21 1.63 77.3 -1.75 -0.38 24.2 82 8 6 2 8 3 1 0  HIC 73 F
18 1.48 3.11 77.9 -1.97 -0.42 24.3 83 8 8 4 5 3 1 0  HIC 73 E
19 2.13 3.14 78.5 -2.06 -0.37 22.6 77 7 8 4 5 5 1 0  HIC 73 B
20 1.47 3.07 90.5 -1.95 -0.30 26.9 82 10 9 2 7 2 1 0  HIC 73 E
21 1.24 1.31 93.4 -1.06 -0.31 16.4 81 9 6 7 7 4 1 0  ADP 401 A MG 402 A HIC 73 C
22 1.21 1.30 107.1 -1.40 -0.34 20.7 82 12 8 6 8 3 1 0  ADP 401 A MG 402 A ADP 401 C
23 1.52 1.77 109.0 -1.70 -0.55 21.9 87 9 11 10 10 3 0 0  HIC 73 D HIC 73 E
24 1.62 1.61 113.0 -1.55 -0.40 22.1 84 14 12 6 9 4 1 0  HIC 73 D HIC 73 E
25 1.55 3.38 114.2 -1.90 -0.50 25.2 85 13 13 5 9 3 0 0  HIC 73 D HIC 73 E
26 1.32 1.50 117.7 -1.49 -0.35 23.5 84 11 11 3 12 1 2 0  HIC 73 E HIC 73 F
27 1.56 2.98 143.9 -1.70 -0.39 20.2 83 12 7 10 9 6 0 0  
28 1.47 3.02 144.9 -1.64 -0.37 21.6 83 16 10 8 7 6 1 0  HIC 73 D
29 1.51 3.04 152.6 -1.80 -0.39 23.0 82 15 10 7 7 6 1 0  HIC 73 D
30 1.27 1.41 174.4 -1.27 -0.39 17.7 84 12 9 12 16 6 1 0  HIC 73 F

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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