PDBsum entry 8f6f

Pore analysis for: 8f6f calculated with

MOLE 2.0

PDB id

8f6f

Pores calculated on whole structure

Pores calculated excluding ligands

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13 pores, coloured by radius

13 pores, coloured by radius

13 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.12

1.59

33.6

0.81

0.18

10.5

85

3

1

2

10

0

0

0

2

1.23

1.49

41.6

0.82

0.07

10.1

87

2

2

3

11

1

0

0

3

1.20

2.16

50.5

0.79

0.08

7.4

90

2

2

4

12

1

0

0

4

1.38

1.61

73.6

1.91

0.58

4.0

81

2

1

2

15

5

0

1

5

1.24

2.46

78.5

-0.32

-0.29

14.7

93

4

6

11

18

1

0

0

6

1.30

1.81

81.2

1.83

0.70

2.5

76

1

1

3

15

8

0

1

7

1.31

2.23

163.4

-0.17

0.08

14.2

74

5

4

6

14

8

1

1

8

1.20

1.51

178.1

-0.09

0.02

14.5

78

4

5

5

19

7

1

1

9

1.27

1.44

27.2

2.00

0.38

5.5

78

0

2

1

6

0

0

2

10

2.00

2.28

29.8

-0.96

-0.42

9.4

78

1

2

0

3

1

3

0

11

1.98

2.26

43.2

-0.29

-0.08

7.8

75

2

2

0

5

1

2

0

12

1.27

1.44

58.2

0.63

-0.09

6.0

80

1

3

1

8

0

3

2

13

3.23

4.15

25.4

-1.08

-0.45

15.1

77

2

2

1

3

1

1

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.