PDBsum entry 8f6c Go to PDB code:  Tunnel analysis for: 8f6c calculated with MOLE 2.0 PDB id 8f6c Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   10 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.18 1.20 130.2 0.75 0.43 8.9 76 5 2 7 22 11 2 0  3PE 1004 E 3PE 1005 E 3PE 401 G 2 1.15 1.53 21.1 1.63 0.48 4.5 70 1 0 1 5 2 0 0   3 1.12 1.21 25.9 0.68 0.08 7.8 80 1 2 2 4 1 0 0   4 1.15 1.53 21.0 1.63 0.48 4.5 70 1 0 1 5 2 0 0   5 1.11 1.21 24.9 0.74 0.11 7.2 80 1 1 2 4 1 0 0   6 1.24 1.31 20.0 0.99 0.63 7.8 60 0 2 0 3 6 0 0   7 1.35 1.47 17.4 -1.12 -0.04 24.3 70 0 4 0 2 4 0 0   8 1.28 1.98 21.1 -0.76 -0.03 11.9 69 2 1 2 4 4 0 0   9 1.28 2.04 22.7 -0.74 0.06 11.2 69 2 1 2 4 4 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.