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PDBsum entry 8f4f
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Pore analysis for: 8f4f calculated with  MOLE 2.0
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PDB id
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8f4f
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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15 pores,
coloured by radius |
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30 pores,
coloured by radius
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30 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.49 |
3.64 |
34.6 |
1.74 |
0.67 |
4.0 |
70 |
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1 |
0 |
0 |
9 |
4 |
1 |
1 |
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PL9 610 a CLA 608 b STE 623 b CLA 404 d LMG 410 d
STE 412 d STE 413 d SQD 102 f
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2 |
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1.53 |
1.57 |
49.0 |
1.05 |
0.73 |
8.7 |
73 |
3 |
2 |
3 |
9 |
5 |
1 |
0 |
CLA 502 c CLA 504 c CLA 508 c CLA 509 c CLA 510 c
DGD 516 c LMG 518 c
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3 |
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1.54 |
1.58 |
64.6 |
0.80 |
0.58 |
7.8 |
76 |
4 |
2 |
2 |
12 |
6 |
1 |
0 |
CLA 608 a CLA 501 c CLA 505 c CLA 506 c CLA 507 c
CLA 509 c BCR 514 c DGD 515 c LMG 521 c
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4 |
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2.61 |
2.74 |
65.8 |
0.01 |
-0.11 |
9.6 |
75 |
0 |
6 |
3 |
9 |
4 |
2 |
0 |
BCR 609 a DGD 614 a FME 1 i
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5 |
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1.73 |
2.01 |
72.5 |
-0.62 |
-0.19 |
10.5 |
77 |
2 |
2 |
5 |
3 |
5 |
1 |
0 |
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6 |
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3.33 |
4.60 |
75.3 |
1.82 |
0.90 |
5.0 |
76 |
4 |
0 |
2 |
16 |
5 |
1 |
0 |
CLA 608 a CLA 501 c CLA 502 c CLA 503 c CLA 504 c
CLA 505 c CLA 506 c CLA 507 c CLA 508 c CLA 509 c
CLA 510 c CLA 512 c BCR 514 c DGD 515 c DGD 516 c
LMG 518 c LMG 521 c
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7 |
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1.58 |
2.72 |
76.1 |
0.14 |
0.21 |
8.8 |
72 |
3 |
1 |
2 |
5 |
7 |
3 |
0 |
PL9 610 a LHG 101 e SQD 102 f
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8 |
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1.18 |
1.32 |
97.1 |
-1.74 |
-0.41 |
18.5 |
81 |
11 |
5 |
9 |
7 |
4 |
2 |
1 |
DGD 516 c DGD 517 c LMG 518 c STE 101 j HEC 201 v
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9 |
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2.55 |
2.69 |
97.6 |
0.29 |
0.19 |
7.3 |
78 |
4 |
2 |
9 |
12 |
11 |
0 |
0 |
CLA 602 b CLA 603 b CLA 608 b CLA 609 b STE 623 b
LMG 410 d STE 412 d DGD 102 h
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10 |
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2.54 |
2.79 |
106.8 |
-0.45 |
0.02 |
11.2 |
74 |
6 |
5 |
7 |
11 |
10 |
1 |
0 |
CLA 602 B CLA 603 B CLA 608 B CLA 609 B LMG 622 B
CLA 404 D STE 413 D DGD 102 H
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11 |
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2.64 |
2.73 |
109.1 |
-0.14 |
-0.09 |
8.6 |
74 |
1 |
8 |
7 |
14 |
8 |
1 |
0 |
SQD 615 A DGD 616 A STE 617 A STE 625 B FME 1 M
FME 1 T BCR 101 T STE 102 T CLA 607 b CLA 614 b
BCR 617 b BCR 618 b BCR 619 b SQD 620 b STE 624 b
FME 1 m LMG 101 m STE 102 t
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12 |
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2.47 |
4.49 |
110.0 |
2.15 |
0.75 |
2.6 |
75 |
4 |
0 |
3 |
30 |
16 |
2 |
0 |
SQD 615 A DGD 616 A STE 617 A BCR 101 T CLA 605 a
CLA 606 a PHO 607 a CLA 611 a CLA 604 b CLA 607 b
CLA 611 b CLA 613 b CLA 614 b BCR 617 b BCR 618 b
BCR 619 b SQD 620 b CLA 403 d PL9 406 d LHG 407 d
LHG 408 d LHG 101 l LMG 101 m
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13 |
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1.21 |
1.20 |
111.3 |
-1.62 |
-0.59 |
17.8 |
81 |
4 |
14 |
7 |
5 |
3 |
4 |
0 |
STE 625 B FME 1 M STE 102 T STE 624 b FME 1 m STE
102 t
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14 |
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1.60 |
2.61 |
111.2 |
0.82 |
0.44 |
7.8 |
69 |
4 |
1 |
2 |
13 |
12 |
2 |
1 |
PL9 610 a CLA 608 b STE 623 b CLA 404 d BCR 405 d
LMG 410 d STE 412 d STE 413 d LHG 101 e SQD 102 f
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15 |
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1.89 |
2.73 |
111.4 |
2.75 |
1.03 |
2.2 |
73 |
2 |
0 |
1 |
32 |
15 |
3 |
0 |
CLA 606 A CLA 607 A PL9 610 A CLA 611 A LHG 614 A
SQD 615 A DGD 616 A PHO 401 D PHO 402 D CLA 403 D
PL9 406 D LMG 407 D SQD 408 D LHG 409 D LHG 101 L
BCR 101 T BCR 619 b
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16 |
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2.13 |
2.20 |
117.5 |
1.94 |
0.83 |
7.2 |
75 |
7 |
0 |
1 |
27 |
10 |
2 |
2 |
PL9 610 A CLA 602 B CLA 603 B CLA 604 B CLA 605 B
CLA 606 B CLA 608 B CLA 609 B CLA 610 B CLA 612 B
CLA 613 B BCR 619 B STE 621 B LMG 622 B CLA 404 D
SQD 408 D STE 413 D BCR 101 H
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17 |
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1.79 |
2.60 |
121.4 |
1.37 |
0.68 |
3.3 |
74 |
1 |
1 |
5 |
16 |
12 |
2 |
0 |
CLA 607 A PL9 610 A LHG 614 A CLA 504 C DGD 516 C
LMG 517 C PHO 402 D CLA 403 D BCR 405 D LMG 407 D
SQD 408 D DGD 101 J STE 102 J
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18 |
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2.36 |
4.49 |
127.0 |
2.21 |
0.75 |
1.9 |
72 |
2 |
1 |
2 |
26 |
15 |
1 |
0 |
CLA 606 A CLA 611 A SQD 615 A DGD 616 A CLA 604 B
CLA 606 B CLA 607 B CLA 611 B CLA 613 B CLA 614 B
BCR 617 B BCR 618 B LMG 620 B SQD 623 B PHO 401 D
PL9 406 D LHG 409 D LHG 412 D LHG 101 L BCR 101 T
CLA 608 a BCR 609 a SQD 613 a DGD 614 a BCR 619 b
FME 1 i BCR 101 t STE 102 t STE 103 t
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19 |
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1.22 |
1.27 |
129.6 |
-1.01 |
-0.32 |
15.7 |
78 |
4 |
12 |
7 |
13 |
6 |
3 |
0 |
STE 625 B FME 1 M STE 102 T BCR 609 a DGD 614 a
STE 624 b FME 1 i FME 1 m STE 102 t
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20 |
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2.13 |
2.21 |
129.1 |
-0.40 |
0.08 |
13.7 |
80 |
11 |
5 |
7 |
15 |
9 |
2 |
0 |
CLA 602 B CLA 603 B CLA 604 B CLA 605 B CLA 606 B
CLA 610 B CLA 612 B CLA 613 B BCR 619 B STE 621 B
DGD 102 H
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21 |
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2.64 |
2.72 |
148.5 |
0.12 |
0.17 |
9.9 |
76 |
8 |
7 |
6 |
22 |
11 |
2 |
1 |
STE 625 B STE 102 T CLA 602 b CLA 603 b CLA 604 b
CLA 605 b CLA 606 b CLA 607 b CLA 608 b CLA 609 b
CLA 610 b CLA 611 b CLA 612 b CLA 613 b CLA 614 b
BCR 617 b BCR 618 b STE 623 b STE 624 b LHG 407 d
LMG 410 d STE 412 d BCR 101 h LHG 101 l FME 1 m
LMG 101 m STE 102 t
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22 |
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2.55 |
2.76 |
152.2 |
0.60 |
0.28 |
8.2 |
79 |
8 |
2 |
10 |
20 |
16 |
0 |
0 |
SQD 615 A DGD 616 A STE 617 A BCR 101 T CLA 602 b
CLA 603 b CLA 604 b CLA 605 b CLA 606 b CLA 607 b
CLA 610 b CLA 611 b CLA 612 b CLA 613 b CLA 614 b
BCR 617 b BCR 618 b BCR 619 b SQD 620 b LHG 407 d
DGD 102 h LHG 101 l LMG 101 m
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23 |
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1.18 |
1.09 |
156.9 |
0.48 |
0.24 |
9.3 |
76 |
6 |
7 |
4 |
29 |
16 |
6 |
0 |
FME 1 M FME 1 T STE 102 T CLA 605 a CLA 606 a PHO
607 a CLA 611 a CLA 604 b CLA 607 b CLA 611 b CLA
613 b CLA 614 b BCR 617 b BCR 618 b STE 624 b CLA
403 d PL9 406 d LHG 407 d LHG 408 d LHG 101 l LMG
101 m
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24 |
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3.35 |
3.37 |
166.8 |
0.48 |
0.31 |
8.8 |
75 |
8 |
5 |
6 |
30 |
13 |
1 |
1 |
STE 625 B STE 102 T BCR 609 a DGD 614 a CLA 602 b
CLA 603 b CLA 604 b CLA 605 b CLA 606 b CLA 607 b
CLA 608 b CLA 609 b CLA 610 b CLA 611 b CLA 612 b
CLA 613 b CLA 614 b BCR 617 b BCR 618 b STE 623 b
STE 624 b LHG 407 d LMG 410 d STE 412 d BCR 101 h
FME 1 i LHG 101 l FME 1 m LMG 101 m STE 102 t
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25 |
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1.18 |
1.12 |
173.4 |
-0.32 |
0.04 |
13.1 |
76 |
10 |
9 |
7 |
26 |
15 |
4 |
1 |
CLA 602 B CLA 603 B CLA 604 B CLA 605 B CLA 606 B
CLA 607 B CLA 608 B CLA 609 B CLA 610 B CLA 611 B
CLA 612 B CLA 613 B CLA 614 B BCR 617 B BCR 618 B
LMG 620 B LMG 622 B STE 625 B CLA 404 D LHG 412 D
STE 413 D BCR 101 H LHG 101 L FME 1 M STE 102 T
STE 624 b
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26 |
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2.51 |
4.09 |
182.6 |
0.60 |
0.34 |
8.3 |
74 |
9 |
4 |
7 |
28 |
20 |
2 |
0 |
CLA 606 A CLA 611 A SQD 615 A DGD 616 A CLA 602 B
CLA 603 B CLA 604 B CLA 605 B CLA 607 B CLA 610 B
CLA 611 B CLA 612 B CLA 613 B CLA 614 B BCR 617 B
BCR 618 B LMG 620 B PHO 401 D PL9 406 D LHG 409 D
LHG 412 D DGD 102 H LHG 101 L BCR 101 T BCR 619 b
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27 |
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1.19 |
1.06 |
202.4 |
-0.51 |
-0.03 |
13.4 |
78 |
12 |
9 |
11 |
20 |
18 |
4 |
0 |
FME 1 M FME 1 T STE 102 T CLA 602 b CLA 603 b CLA
604 b CLA 605 b CLA 607 b CLA 610 b CLA 611 b CLA
612 b CLA 613 b CLA 614 b BCR 617 b BCR 618 b STE
624 b LHG 407 d DGD 102 h LHG 101 l LMG 101 m
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28 |
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3.36 |
3.33 |
210.6 |
0.75 |
0.50 |
8.2 |
74 |
14 |
2 |
6 |
43 |
22 |
2 |
2 |
CLA 602 B CLA 603 B CLA 604 B CLA 605 B CLA 606 B
CLA 607 B CLA 608 B CLA 609 B CLA 610 B CLA 611 B
CLA 612 B CLA 613 B CLA 614 B BCR 617 B BCR 618 B
LMG 620 B LMG 622 B STE 625 B CLA 404 D LHG 412 D
STE 413 D BCR 101 H LHG 101 L STE 102 T CLA 602 b
CLA 603 b CLA 604 b CLA 605 b CLA 606 b CLA 607 b
CLA 608 b CLA 609 b CLA 610 b CLA 611 b CLA 612 b
CLA 613 b CLA 614 b BCR 617 b BCR 618 b STE 623 b
STE 624 b LHG 407 d LMG 410 d STE 412 d BCR 101 h
LHG 101 l LMG 101 m
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29 |
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1.24 |
1.42 |
226.4 |
-0.86 |
-0.15 |
13.9 |
79 |
13 |
13 |
13 |
20 |
16 |
5 |
0 |
CLA 602 B CLA 603 B CLA 604 B CLA 605 B CLA 607 B
CLA 610 B CLA 611 B CLA 612 B CLA 613 B CLA 614 B
BCR 617 B BCR 618 B LMG 620 B STE 625 B LHG 412 D
DGD 102 H LHG 101 L FME 1 M STE 102 T STE 624 b
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30 |
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2.54 |
2.68 |
230.8 |
-0.67 |
-0.08 |
12.0 |
78 |
11 |
10 |
14 |
18 |
17 |
2 |
0 |
STE 625 B STE 102 T CLA 602 b CLA 603 b CLA 604 b
CLA 605 b CLA 606 b CLA 607 b CLA 610 b CLA 611 b
CLA 612 b CLA 613 b CLA 614 b BCR 617 b BCR 618 b
STE 624 b LHG 407 d DGD 102 h LHG 101 l FME 1 m
LMG 101 m STE 102 t
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program