 |
PDBsum entry 8evc
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 8evc calculated with MOLE 2.0
|
PDB id
|
|
|
|
8evc
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
23 pores,
coloured by radius |
 |
19 pores,
coloured by radius
|
19 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.34 |
2.56 |
26.3 |
-0.83 |
0.02 |
17.2 |
82 |
 |
4 |
2 |
1 |
3 |
4 |
0 |
0 |
 |
|
 |
 |
2 |
 |
2.38 |
4.38 |
26.7 |
0.29 |
0.84 |
5.9 |
73 |
1 |
0 |
3 |
3 |
7 |
0 |
0 |
|
 |
3 |
 |
1.82 |
2.62 |
33.6 |
-1.82 |
-0.32 |
23.5 |
76 |
3 |
4 |
3 |
2 |
5 |
1 |
0 |
|
 |
4 |
 |
2.21 |
2.34 |
55.5 |
-1.33 |
-0.26 |
9.7 |
85 |
3 |
2 |
6 |
9 |
6 |
0 |
0 |
|
 |
5 |
 |
2.20 |
2.32 |
68.7 |
-1.55 |
-0.48 |
17.8 |
86 |
3 |
6 |
8 |
9 |
5 |
0 |
0 |
|
 |
6 |
 |
1.17 |
1.84 |
74.9 |
-0.71 |
-0.48 |
11.4 |
92 |
2 |
7 |
8 |
11 |
4 |
0 |
0 |
|
 |
7 |
 |
1.89 |
2.61 |
81.1 |
-1.80 |
-0.53 |
20.7 |
81 |
3 |
10 |
9 |
5 |
6 |
1 |
0 |
|
 |
8 |
 |
1.23 |
2.49 |
83.8 |
-0.39 |
-0.10 |
3.9 |
85 |
2 |
1 |
11 |
16 |
8 |
0 |
0 |
|
 |
9 |
 |
1.23 |
2.48 |
84.0 |
-0.50 |
-0.13 |
8.8 |
83 |
2 |
4 |
9 |
14 |
7 |
0 |
0 |
|
 |
10 |
 |
1.82 |
1.95 |
94.1 |
-1.83 |
-0.18 |
23.2 |
79 |
11 |
8 |
9 |
7 |
10 |
1 |
0 |
|
 |
11 |
 |
1.30 |
2.36 |
117.8 |
-1.11 |
-0.22 |
13.0 |
82 |
3 |
7 |
14 |
15 |
11 |
1 |
0 |
|
 |
12 |
 |
2.39 |
3.01 |
140.4 |
-1.64 |
-0.19 |
28.2 |
81 |
14 |
11 |
4 |
11 |
5 |
0 |
0 |
PCG 802 A
|
 |
13 |
 |
2.21 |
2.34 |
157.2 |
-2.01 |
-0.34 |
30.6 |
79 |
16 |
15 |
5 |
10 |
5 |
0 |
0 |
PCG 802 A
|
 |
14 |
 |
2.24 |
2.27 |
157.9 |
-1.81 |
-0.29 |
26.9 |
80 |
16 |
15 |
7 |
12 |
7 |
0 |
0 |
PCG 802 A
|
 |
15 |
 |
1.33 |
1.77 |
172.2 |
-1.32 |
-0.35 |
22.9 |
84 |
15 |
18 |
7 |
14 |
5 |
0 |
0 |
PCG 802 A
|
 |
16 |
 |
1.28 |
2.45 |
173.4 |
-1.59 |
-0.20 |
26.4 |
78 |
14 |
14 |
5 |
18 |
8 |
0 |
0 |
PCG 802 A
|
 |
17 |
 |
2.03 |
2.61 |
181.5 |
-1.96 |
-0.28 |
27.1 |
77 |
17 |
18 |
7 |
10 |
9 |
1 |
0 |
PCG 802 A
|
 |
18 |
 |
1.23 |
2.42 |
207.6 |
0.24 |
0.29 |
14.1 |
80 |
11 |
6 |
7 |
20 |
11 |
0 |
0 |
PCG 802 B
|
 |
19 |
 |
1.37 |
2.11 |
233.8 |
-0.91 |
-0.22 |
16.5 |
86 |
12 |
11 |
15 |
20 |
7 |
1 |
0 |
PCG 802 B
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |