 |
PDBsum entry 8epr
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 8epr calculated with  MOLE 2.0
|
PDB id
|
|
|
|
8epr
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
3 pores,
coloured by radius |
|
4 pores,
coloured by radius
|
4 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.63 |
3.50 |
38.4 |
-1.70 |
-0.41 |
27.5 |
78 |
|
6 |
4 |
0 |
3 |
2 |
1 |
0 |
|
|
 |
|
2 |
 |
1.24 |
1.56 |
69.9 |
-1.27 |
-0.40 |
17.4 |
76 |
6 |
3 |
6 |
4 |
3 |
1 |
0 |
|
|
3 |
 |
1.59 |
1.59 |
88.6 |
-1.86 |
-0.27 |
23.4 |
83 |
9 |
7 |
6 |
5 |
3 |
1 |
0 |
NAG 1 G SO4 1 I
|
 |
4 |
 |
1.40 |
2.36 |
142.6 |
-2.24 |
-0.38 |
25.3 |
82 |
7 |
6 |
5 |
3 |
3 |
1 |
0 |
NAG 1 G
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program