PDBsum entry 8emk Go to PDB code:  Tunnel analysis for: 8emk calculated with MOLE 2.0 PDB id 8emk Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.68 1.70 21.5 -1.03 0.03 12.8 76 1 3 2 2 4 1 0   2 1.70 1.79 15.9 -0.33 -0.01 6.6 66 2 0 2 2 3 1 0   3 1.57 1.57 15.8 -1.34 -0.19 24.9 88 3 2 1 2 0 1 0   4 1.15 1.24 17.6 -1.48 -0.36 21.0 86 2 1 1 2 0 1 0   5 1.12 2.41 15.4 -1.80 -0.23 17.7 75 1 2 1 2 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.