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PDBsum entry 8efc

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Pore analysis for: 8efc calculated with MOLE 2.0 PDB id
8efc
Pores calculated on whole structure Pores calculated excluding ligands

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11 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.41 1.90 27.7 -1.24 -0.26 23.1 84 4 3 3 4 0 0 0  
2 2.80 2.80 29.7 -0.63 -0.83 6.9 77 0 2 1 0 0 1 0  DG 8 E DC 9 E DT 10 E DT 12 E DA 13 E DC 14 E DT
13 F DC 14 F DC 15 F DG 16 F
3 2.94 3.78 29.7 -2.30 -0.79 22.4 85 2 2 5 1 0 0 0  DG 8 E DC 9 E DT 10 E DG 16 F DT 17 F DA 18 F DG
19 F
4 1.69 1.70 31.2 -1.58 -0.52 13.3 83 2 1 2 2 2 0 0  DG 16 E DT 17 F DA 18 F
5 2.65 2.65 31.6 -0.77 -0.40 8.2 86 2 1 2 1 2 0 0  DG 8 E DG 15 E DG 16 E DA 17 E DT 18 E DC 15 F DG
16 F DT 17 F
6 1.37 1.47 43.6 -2.33 -0.38 29.1 79 11 6 2 0 2 0 3  
7 1.36 1.48 62.8 -1.48 -0.33 24.6 83 9 9 6 4 1 0 2  
8 3.03 3.37 75.0 -1.51 -0.28 23.8 82 4 3 2 1 3 0 0  DG 15 E DG 16 E
9 1.47 2.00 87.0 -1.59 -0.54 20.3 86 6 5 3 5 0 0 0  DG 15 E DG 16 E DT 17 F DA 18 F
10 1.75 1.75 101.4 -2.08 -0.43 26.6 86 9 4 2 3 0 0 1  DG 15 E DG 16 E DT 17 F DA 18 F

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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