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PDBsum entry 8efc
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Pore analysis for: 8efc calculated with MOLE 2.0
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PDB id
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8efc
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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11 pores,
coloured by radius |
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10 pores,
coloured by radius
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10 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.41 |
1.90 |
27.7 |
-1.24 |
-0.26 |
23.1 |
84 |
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4 |
3 |
3 |
4 |
0 |
0 |
0 |
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2 |
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2.80 |
2.80 |
29.7 |
-0.63 |
-0.83 |
6.9 |
77 |
0 |
2 |
1 |
0 |
0 |
1 |
0 |
DG 8 E DC 9 E DT 10 E DT 12 E DA 13 E DC 14 E DT 13 F DC 14 F DC 15 F DG 16 F
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3 |
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2.94 |
3.78 |
29.7 |
-2.30 |
-0.79 |
22.4 |
85 |
2 |
2 |
5 |
1 |
0 |
0 |
0 |
DG 8 E DC 9 E DT 10 E DG 16 F DT 17 F DA 18 F DG 19 F
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4 |
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1.69 |
1.70 |
31.2 |
-1.58 |
-0.52 |
13.3 |
83 |
2 |
1 |
2 |
2 |
2 |
0 |
0 |
DG 16 E DT 17 F DA 18 F
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5 |
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2.65 |
2.65 |
31.6 |
-0.77 |
-0.40 |
8.2 |
86 |
2 |
1 |
2 |
1 |
2 |
0 |
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DG 8 E DG 15 E DG 16 E DA 17 E DT 18 E DC 15 F DG 16 F DT 17 F
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6 |
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1.37 |
1.47 |
43.6 |
-2.33 |
-0.38 |
29.1 |
79 |
11 |
6 |
2 |
0 |
2 |
0 |
3 |
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7 |
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1.36 |
1.48 |
62.8 |
-1.48 |
-0.33 |
24.6 |
83 |
9 |
9 |
6 |
4 |
1 |
0 |
2 |
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8 |
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3.03 |
3.37 |
75.0 |
-1.51 |
-0.28 |
23.8 |
82 |
4 |
3 |
2 |
1 |
3 |
0 |
0 |
DG 15 E DG 16 E
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9 |
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1.47 |
2.00 |
87.0 |
-1.59 |
-0.54 |
20.3 |
86 |
6 |
5 |
3 |
5 |
0 |
0 |
0 |
DG 15 E DG 16 E DT 17 F DA 18 F
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10 |
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1.75 |
1.75 |
101.4 |
-2.08 |
-0.43 |
26.6 |
86 |
9 |
4 |
2 |
3 |
0 |
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1 |
DG 15 E DG 16 E DT 17 F DA 18 F
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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