PDBsum entry 8dv4 Go to PDB code:  Tunnel analysis for: 8dv4 calculated with MOLE 2.0 PDB id 8dv4 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 tunnel, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.60 1.60 33.2 2.67 1.07 1.8 71 1 0 1 9 6 0 0  CUY 605 A PIE 501 D 2 1.60 1.60 33.5 2.37 1.00 3.1 75 2 0 1 8 5 0 0  CUY 605 A PIE 501 D 3 2.16 4.06 36.7 1.76 0.70 4.8 78 0 2 1 10 7 0 0  CUY 605 A PIE 501 D 4 1.85 3.07 37.5 1.64 0.69 5.4 79 1 2 1 9 7 0 0  CUY 605 A PIE 501 D 5 1.49 1.53 38.0 1.47 0.67 4.6 74 1 1 2 8 8 0 0  CUY 605 A PIE 501 D 6 1.50 1.54 38.7 1.39 0.67 5.1 76 2 1 2 7 8 0 0  CUY 605 A PIE 501 D 7 1.28 1.50 19.6 -0.89 0.15 10.3 81 1 3 2 2 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.