PDBsum entry 8dlf

Viral protein/DNA

PDB id: 8dlf

Contents

Protein chains

160 a.a.

DNA/RNA

Waters ×4

PDB id:

8dlf

Name:

Viral protein/DNA

Title:

Ebna1 DNA binding domain (dbd) (458-617)+2 repeats of family repeat (fr) region

Structure:

Epstein-barr nuclear antigen 1. Chain: a, b, c, d. Synonym: ebna-1,ebv nuclear antigen 1. Engineered: yes. 2xfr DNA (56-mer). Chain: e. Engineered: yes. 2xfr DNA (56-mer). Chain: f.

Source:

Human herpesvirus 4 strain b95-8. Epstein-barr virus (strain b95-8). Organism_taxid: 10377. Strain: b95-8. Gene: ebna1, bkrf1. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008. Expressed in: chemical production metagenome. Expression_system_taxid: 2495586.

Authors:

Y.Mei,P.M.Lieberman,K.Murakami

Key ref:

Y.Mei et al. (2022). Cryo-Em structure and functional studies of ebna1 bin the family of repeats and dyad symmetry elements of epstein-Barr virus orip.. J virol, 96, 94922. PubMed id: 36037477

Date:

07-Jul-22 Release date: 17-May-23

Protein chains

P03211  (EBNA1_EBVB9) -  Epstein-Barr nuclear antigen 1 from Epstein-Barr virus (strain B95-8)

Seq: 641 a.a.

Struc: 160 a.a.

DNA/RNA chains

A-T-C-T-G-G-G-T-A-G-T-A-T-A-T-G-C-T-A-T-C-C-T-A-A-T-T-T-A-T-A-T-C-T-G-G-G-T-A- 56 bases

G-A-T-A-G-G-A-T-A-G-C-C-T-A-T-G-C-T-A-C-C-C-A-G-A-T-A-T-A-A-A-T-T-A-G-G-A-T-A- 56 bases

Enzyme reactions

• Enzyme class: E.C.3.1.21.- - ?????