PDBsum entry 8df5 Go to PDB code:  Pore analysis for: 8df5 calculated with MOLE 2.0 PDB id 8df5 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   17 pores, coloured by radius 16 pores, coloured by radius 16 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.33 2.25 27.3 -0.43 0.23 12.0 74 1 1 3 2 5 0 0  CL 1114 E 2 2.26 2.55 33.2 -1.81 -0.25 11.6 85 2 4 9 4 3 0 0   3 3.66 4.79 36.3 -1.63 -0.75 15.1 83 3 2 1 1 0 2 0   4 1.33 2.29 37.9 -1.67 -0.17 21.3 74 5 2 1 1 6 1 0  CL 1114 E CL 1116 E 5 1.85 2.37 49.8 -1.22 -0.09 20.0 80 5 5 3 4 5 2 0  CL 1215 F 6 1.37 1.36 63.7 -2.15 -0.59 19.1 94 2 2 9 2 2 0 0  CL 303 C 7 1.42 2.18 79.9 -0.91 -0.20 13.0 82 2 4 10 3 8 2 0  NAG 1205 F CL 1213 F 8 2.60 3.08 86.3 -2.16 -0.77 22.9 85 8 6 6 1 0 3 0   9 1.44 2.22 95.7 -1.13 -0.36 15.6 82 4 5 7 4 8 3 0  NAG 1205 F CL 1213 F 10 2.23 2.27 96.2 -2.17 -0.66 24.5 86 7 8 6 5 0 4 0  EDO 1108 E EDO 302 L 11 3.43 6.04 105.1 -2.23 -0.76 23.7 84 7 9 6 4 0 5 0  EDO 1108 E EDO 302 L 12 2.23 2.29 118.3 -1.55 -0.63 15.8 85 8 5 5 4 0 5 0  EDO 1108 E EDO 302 L 13 1.48 2.15 141.7 -0.63 -0.23 10.2 81 3 7 11 9 9 3 0  NAG 1205 F CL 1213 F NAG 1 I NAG 2 I 14 3.16 3.17 27.3 -0.68 -0.48 10.5 81 2 2 2 3 0 2 0   15 0.99 1.65 31.8 0.55 0.53 3.0 67 1 0 0 6 3 3 0   16 1.01 1.75 34.9 -0.25 0.34 7.5 67 2 0 1 4 3 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.