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PDBsum entry 8dch

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 8dch calculated with MOLE 2.0 PDB id
8dch
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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0 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.28 2.69 19.4 1.28 0.42 13.1 86 2 2 1 5 0 0 0  G52 201 A
2 1.27 2.81 27.8 1.36 0.45 11.9 83 1 2 0 7 1 0 0  G52 201 A
3 1.26 2.79 33.6 1.10 0.32 8.8 88 2 4 1 9 0 1 0  G52 201 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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