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PDBsum entry 8cxy
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Pore analysis for: 8cxy calculated with MOLE 2.0
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PDB id
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8cxy
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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4 pores,
coloured by radius |
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7 pores,
coloured by radius
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7 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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3.49 |
5.41 |
48.9 |
-0.69 |
-0.24 |
22.8 |
75 |
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5 |
8 |
0 |
4 |
2 |
0 |
0 |
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EDO 606 B DT 2 D DC 3 D DA 4 F EDO 102 F
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2 |
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1.74 |
1.74 |
57.6 |
-1.99 |
-0.48 |
27.6 |
77 |
7 |
7 |
3 |
3 |
3 |
0 |
0 |
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3 |
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1.20 |
1.44 |
59.7 |
-1.19 |
-0.45 |
24.4 |
73 |
6 |
5 |
1 |
5 |
2 |
0 |
0 |
EDO 603 A DC 3 D DA 4 D DG 5 E DA 6 E DC 7 E
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4 |
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3.34 |
3.78 |
61.4 |
-0.68 |
-0.23 |
18.2 |
78 |
4 |
8 |
3 |
5 |
3 |
0 |
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EDO 606 B DT 2 D DC 3 D DA 4 F EDO 102 F
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5 |
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2.33 |
3.31 |
117.4 |
-1.37 |
-0.38 |
18.6 |
81 |
5 |
4 |
5 |
1 |
2 |
0 |
1 |
DT 10 H DC 11 H DC 12 H DT 2 I DG 4 I DG 5 I
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6 |
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1.96 |
2.10 |
212.9 |
-1.67 |
-0.56 |
19.8 |
80 |
17 |
11 |
9 |
3 |
3 |
0 |
1 |
DG 9 F DT 10 F DC 11 F DC 12 F DC 13 F DT 2 G DG 3 G DG 4 G DG 5 G DA 6 G DC 7 G DT 8 G DT 9 G DT 10 G DT 11 G DT 12 G DG 13 G DA 14 G EDO 901 G DT 2 H DC 3 H
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7 |
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1.22 |
1.37 |
139.9 |
-0.37 |
-0.03 |
12.3 |
80 |
3 |
5 |
4 |
7 |
5 |
1 |
1 |
Q8R 603 C
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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