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PDBsum entry 8cxx
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Pore analysis for: 8cxx calculated with MOLE 2.0
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PDB id
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8cxx
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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12 pores,
coloured by radius |
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11 pores,
coloured by radius
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11 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.75 |
1.95 |
26.5 |
0.53 |
0.43 |
14.9 |
69 |
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2 |
3 |
0 |
3 |
5 |
0 |
0 |
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EDO 605 A DC 3 D DA 4 D DT 1 F
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2 |
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1.54 |
1.61 |
29.8 |
-0.05 |
-0.05 |
7.2 |
80 |
1 |
2 |
2 |
4 |
1 |
1 |
1 |
T9I 1009 B DT 1 F DT 11 G DT 12 G DG 13 G DA 14 G
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3 |
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1.90 |
1.90 |
30.4 |
-1.90 |
-0.50 |
31.4 |
75 |
4 |
5 |
0 |
1 |
0 |
0 |
0 |
DA 14 G
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4 |
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3.83 |
3.83 |
41.2 |
-1.19 |
-0.53 |
22.8 |
75 |
5 |
6 |
0 |
2 |
1 |
0 |
0 |
EDO 1006 B DT 2 D DC 3 D DT 1 F DT 2 F DC 3 F DA 4 F EDO 101 F
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5 |
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1.92 |
1.89 |
43.3 |
-0.60 |
-0.44 |
15.2 |
74 |
2 |
5 |
0 |
2 |
1 |
0 |
0 |
EDO 1006 B DT 2 D DC 3 D DT 1 F DT 2 F DC 3 F DA 4 F EDO 101 F DA 14 G
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6 |
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1.56 |
1.60 |
45.0 |
-0.29 |
0.11 |
10.5 |
85 |
1 |
3 |
4 |
6 |
2 |
1 |
1 |
T9I 1009 B DT 1 F DG 3 G DT 11 G DT 12 G DG 13 G DA 14 G
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7 |
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1.76 |
1.96 |
55.2 |
-0.74 |
-0.12 |
23.5 |
72 |
7 |
6 |
0 |
4 |
4 |
0 |
0 |
EDO 1006 B DT 2 D DA 4 F EDO 101 F
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8 |
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1.75 |
1.96 |
57.3 |
-0.34 |
-0.09 |
17.8 |
70 |
4 |
5 |
0 |
5 |
4 |
0 |
0 |
EDO 1006 B DT 2 D DA 4 F EDO 101 F DA 14 G
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9 |
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1.56 |
1.59 |
61.3 |
-1.07 |
-0.22 |
19.3 |
82 |
4 |
5 |
3 |
5 |
1 |
1 |
1 |
T9I 1009 B DT 1 F DT 11 G DT 12 G DG 13 G DA 14 G
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10 |
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1.47 |
1.48 |
97.2 |
-0.93 |
-0.50 |
10.4 |
82 |
4 |
0 |
2 |
3 |
2 |
0 |
0 |
EDO 607 A DA 6 D DA 7 D DA 8 D DG 9 D DT 10 D DC 11 D DC 12 D DG 5 E DA 6 E DC 7 E DT 8 E DT 9 E
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11 |
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1.49 |
1.62 |
105.9 |
-1.39 |
-0.50 |
14.8 |
84 |
7 |
1 |
3 |
3 |
1 |
0 |
0 |
EDO 607 A DA 8 D DG 9 D DT 10 D DC 11 D DG 5 E DA 6 E DC 7 E DT 11 E DT 12 E
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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