PDBsum entry 8clh Go to PDB code:  Tunnel analysis for: 8clh calculated with MOLE 2.0 PDB id 8clh Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   12 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.23 1.40 35.8 1.88 0.69 1.6 86 0 1 2 15 3 1 0   2 1.23 1.40 37.3 1.85 0.59 1.6 86 0 1 2 18 3 1 0   3 1.20 1.19 28.8 -1.13 -0.45 12.3 78 1 1 5 2 2 2 0   4 1.23 3.25 23.4 1.70 0.66 8.2 79 1 1 2 8 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.