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PDBsum entry 8c7f

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 8c7f calculated with MOLE 2.0 PDB id
8c7f
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.16 3.16 26.9 -3.14 -0.70 27.2 85 4 3 4 0 0 0 0  
2 3.48 6.27 27.4 -3.67 -0.67 30.0 80 4 3 2 0 0 0 0  
3 3.67 5.22 31.0 -2.93 -0.59 37.0 77 7 6 2 2 0 0 0  
4 1.17 1.20 26.2 -1.09 -0.63 13.4 88 4 2 4 1 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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