PDBsum entry 8buf Go to PDB code:  Pore analysis for: 8buf calculated with MOLE 2.0 PDB id 8buf Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   26 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.36 1.36 77.5 -2.22 -0.46 22.4 81 10 6 5 2 3 0 0   2 1.45 1.71 82.0 -1.87 -0.38 20.8 79 11 6 5 3 5 1 0  SO4 1209 G SO4 1106 H 3 1.46 1.72 98.8 -1.16 -0.18 11.4 77 5 8 6 5 7 3 0   4 1.66 1.86 125.5 -1.60 -0.42 21.7 79 16 12 7 7 5 2 0  SO4 1209 D SO4 1104 E SO4 1105 E 5 1.58 1.80 126.5 -1.68 -0.47 18.9 81 15 11 9 6 6 3 0  SO4 1209 D SO4 1104 E SO4 1105 E 6 1.55 1.95 129.8 -1.51 -0.19 15.3 77 13 7 6 6 9 2 0  SO4 1209 G 7 1.45 1.72 130.0 -1.59 -0.46 19.3 80 9 12 7 5 5 2 1  SO4 1201 G SO4 1208 G SO4 1106 H 8 1.51 1.73 134.5 -1.32 -0.38 15.3 82 12 6 13 8 4 1 0  RW6 1101 B 9 1.61 1.79 133.7 -1.88 -0.48 21.8 83 11 10 12 5 3 1 0  RW6 1101 H 10 1.65 2.50 137.7 -1.92 -0.55 23.4 87 20 10 10 10 0 2 0  SO4 1209 G 11 1.58 1.76 138.1 -1.98 -0.52 23.6 79 16 10 5 5 4 2 1  SO4 1201 G SO4 1208 G SO4 1209 G 12 1.35 1.35 142.2 -1.67 -0.50 22.4 79 15 11 6 7 2 3 2  SO4 1201 A SO4 1206 A 13 1.59 1.75 147.4 -1.69 -0.50 20.9 79 17 11 7 5 6 3 1  SO4 1201 D SO4 1208 D SO4 1209 D SO4 1104 E SO4 1105 E 14 1.53 1.86 161.5 -1.26 -0.38 17.3 86 10 10 13 10 3 0 0  RW6 1101 B RW6 1101 H 15 1.55 1.85 162.2 -1.64 -0.36 17.7 77 10 11 7 7 8 3 1  SO4 1201 G SO4 1208 G 16 1.81 1.86 177.0 -1.09 -0.24 18.1 78 16 10 11 16 6 4 3  SO4 1205 A SO4 1208 A 17 1.60 2.08 179.4 -1.86 -0.61 18.4 83 11 14 13 5 3 5 0   18 1.74 1.97 202.1 -1.99 -0.53 21.8 81 20 15 13 5 6 3 0  SO4 1209 G 19 1.52 1.90 207.3 -1.38 -0.51 15.7 85 10 14 14 10 3 4 0  RW6 1101 B 20 1.57 1.76 230.0 -1.54 -0.46 18.6 83 19 15 14 10 6 2 0  RW6 1101 B SO4 1209 G 21 1.12 1.12 227.3 -1.70 -0.45 22.3 83 17 17 13 11 3 3 2  SO4 1201 A SO4 1206 A RW6 1101 H 22 1.99 2.67 240.7 -1.92 -0.59 21.5 81 18 19 15 6 6 4 1  SO4 1201 G SO4 1208 G 23 1.44 1.74 262.1 -1.29 -0.28 19.0 82 19 17 19 21 7 4 3  SO4 1205 A SO4 1208 A RW6 1101 H 24 1.20 3.08 261.9 -1.88 -0.38 24.8 78 27 23 14 9 10 1 1  SO4 1207 D SO4 1209 D RW6 1101 E SO4 1104 E SO4 1105 E 25 1.32 1.33 264.4 -1.58 -0.52 18.2 83 17 18 13 14 3 7 2  SO4 1201 A SO4 1206 A 26 1.52 1.52 268.6 -1.57 -0.51 19.2 83 17 19 16 11 6 3 1  RW6 1101 B SO4 1201 G SO4 1208 G 27 1.28 1.28 275.9 -1.80 -0.42 22.2 80 24 24 19 9 9 2 4  SO4 1204 D SO4 1206 D 28 1.31 1.96 311.0 -1.82 -0.43 24.1 79 26 26 16 12 9 2 5  SO4 1201 D SO4 1204 D SO4 1206 D SO4 1208 D 29 1.51 1.72 353.5 -1.47 -0.28 19.8 78 23 32 22 16 15 3 4  SO4 1204 D SO4 1206 D 30 1.36 3.03 432.2 -1.70 -0.26 22.3 79 35 31 21 18 18 2 1  SO4 1207 D RW6 1101 E SO4 1209 G Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.