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PDBsum entry 8bit

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 8bit calculated with MOLE 2.0 PDB id
8bit
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.83 2.83 25.4 -1.61 -0.57 28.2 71 1 3 0 2 1 0 0  
2 3.54 3.54 45.8 -2.16 -0.55 32.0 76 6 7 0 2 3 0 0  
3 1.55 2.02 74.4 -1.70 -0.38 28.1 80 9 7 1 5 3 1 0  
4 1.50 1.67 82.9 -1.65 -0.23 21.9 79 10 5 4 6 5 2 0  6R9 601 B COA 602 B
5 1.55 1.98 84.6 -1.99 -0.40 32.1 84 10 7 1 6 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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