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PDBsum entry 8b4f
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Pore analysis for: 8b4f calculated with  MOLE 2.0
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PDB id
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8b4f
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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3 pores,
coloured by radius |
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7 pores,
coloured by radius
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7 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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3.31 |
3.43 |
41.4 |
-2.98 |
-0.83 |
27.0 |
81 |
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8 |
10 |
5 |
1 |
0 |
2 |
0 |
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EDO 305 C
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2 |
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1.50 |
1.82 |
46.1 |
-1.69 |
-0.55 |
19.6 |
85 |
4 |
6 |
7 |
2 |
4 |
0 |
0 |
EDO 304 A
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3 |
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2.19 |
2.19 |
46.5 |
-2.20 |
-0.83 |
24.1 |
81 |
4 |
9 |
5 |
1 |
2 |
1 |
0 |
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4 |
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1.50 |
1.84 |
47.6 |
-1.79 |
-0.70 |
19.0 |
86 |
5 |
7 |
7 |
3 |
1 |
1 |
0 |
EDO 304 A
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5 |
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1.49 |
1.83 |
52.8 |
-1.50 |
-0.42 |
18.8 |
81 |
5 |
5 |
5 |
4 |
4 |
0 |
0 |
EDO 304 A
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6 |
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2.19 |
2.19 |
57.3 |
-2.37 |
-0.86 |
26.1 |
80 |
6 |
12 |
5 |
0 |
2 |
2 |
0 |
EDO 305 C
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7 |
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1.50 |
1.84 |
58.4 |
-2.09 |
-0.75 |
22.1 |
84 |
7 |
10 |
7 |
2 |
1 |
2 |
0 |
EDO 304 A EDO 305 C
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program