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PDBsum entry 8awm

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Top Page protein Protein-protein interface(s) tunnels links
Tunnel analysis for: 8awm calculated with MOLE 2.0 PDB id
8awm
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.37 1.37 16.6 -0.79 -0.26 10.7 74 2 1 1 2 4 0 0  
2 1.12 1.11 23.6 -0.88 -0.62 3.9 83 0 1 2 0 1 2 0  
3 1.05 1.05 43.3 -1.14 -0.65 8.5 81 2 2 2 0 1 3 0  
4 1.21 1.36 17.0 0.26 -0.42 4.7 88 0 1 2 3 0 1 0  
5 1.22 1.37 19.8 0.09 -0.51 6.0 91 0 2 2 3 0 0 0  
6 1.16 1.78 16.2 2.47 0.47 3.4 97 0 1 0 7 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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