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PDBsum entry 8atc

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 8atc calculated with MOLE 2.0 PDB id
8atc
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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5 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.25 1.47 18.9 0.49 0.32 6.5 72 1 2 1 4 2 1 0  
2 1.16 1.47 19.3 0.26 0.23 7.9 72 0 2 1 4 2 1 0  
3 1.37 1.37 20.1 -1.73 -0.65 16.4 84 4 2 1 2 0 2 0  PAL 311 C
4 1.37 1.37 20.7 -1.51 -0.58 12.7 84 4 1 1 2 0 2 0  PAL 311 C
5 1.38 1.38 26.7 -1.71 -0.58 15.6 88 6 0 3 2 0 1 0  PAL 311 C
6 1.23 1.66 15.9 -1.10 -0.18 28.5 85 1 2 1 2 0 0 0  
7 1.28 1.52 26.2 -1.55 -0.47 28.4 91 1 3 2 3 0 0 0  
8 1.27 1.42 15.7 -1.14 -0.33 20.0 88 2 0 1 2 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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