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PDBsum entry 8abh

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 8abh calculated with MOLE 2.0 PDB id
8abh
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.05 2.33 54.0 0.95 0.58 5.9 79 1 2 5 13 10 0 0  PC1 503 N
2 1.06 2.33 56.3 0.98 0.59 5.9 81 1 2 5 15 9 0 0  PC1 503 N
3 1.01 1.27 24.4 -0.62 -0.23 10.5 77 2 1 1 2 4 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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