PDBsum entry 8a6c Go to PDB code:  Tunnel analysis for: 8a6c calculated with MOLE 2.0 PDB id 8a6c Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 tunnel, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.20 3.14 83.9 0.67 0.46 4.9 74 1 2 2 16 10 2 0  OLC 406 A OLC 412 A RET 402 B OLC 406 B OLC 409 B 2 1.21 2.16 85.0 0.54 0.45 5.6 76 2 2 3 16 10 1 0  OLC 406 A RET 402 B OLC 405 B 3 1.20 2.14 87.6 0.23 0.33 7.2 75 1 4 3 15 11 1 0  OLC 406 A OLC 412 A RET 402 B OLC 409 B 4 1.20 2.14 91.6 0.81 0.52 4.7 76 1 2 2 17 10 2 0  OLC 406 A OLC 412 A OLC 413 A RET 402 B OLC 406 B OLC 409 B 5 1.25 1.43 96.5 0.74 0.51 5.3 76 2 2 2 18 10 2 0  OLC 406 A OLC 412 A RET 402 B OLC 406 B OLC 407 B OLC 409 B 6 1.44 2.70 19.2 1.23 0.52 5.7 78 2 0 0 5 2 0 1  OLC 411 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.