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PDBsum entry 8k9l

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protein ligands Protein-protein interface(s) links
Signaling protein PDB id
8k9l

 

 

 

 

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Contents
Protein chains
282 a.a.
224 a.a.
339 a.a.
59 a.a.
235 a.a.
Ligands
TYR-DAL-GLY-MEA-
ETA
VV9
PDB id:
8k9l
Name: Signaling protein
Title: Full agonist- and positive allosteric modulator-bound mu-type opioid receptor-g protein complex
Structure: Soluble cytochrome b562,mu-type opioid receptor,mu-type opioid receptor. Chain: r. Synonym: m-or-1,mor-1,mu opiate receptor,mu opioid receptor,mop,hmop. Engineered: yes. Mutation: yes. Other_details: n-terminal residues (m1-g63) of mor were replaced with the thermostabilized apocytochrome b562ril from escherichia coli (m7w, h102i and r106l) (bril) protein and a linker sequence
Source: Escherichia coli, homo sapiens. Human. Organism_taxid: 562, 9606. Gene: cybc, oprm1, mor1. Expressed in: spodoptera frugiperda. Expression_system_taxid: 7108. Synthetic: yes. Synthetic construct. Organism_taxid: 32630.
Authors: T.Hisano,T.Uchikubo-Kamo,M.Shirouzu,S.Imai,S.Kaneko,I.Shimada
Key ref: S.Kaneko et al. (2024). Structural and dynamic insights into the activation o mu-Opioid receptor by an allosteric modulator.. Nat commun, 15, 3544. PubMed id: 38740791
Date:
01-Aug-23     Release date:   29-May-24    
PROCHECK
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 Headers
 References

Protein chain
Pfam   ArchSchema ?
P0ABE7  (C562_ECOLX) -  Soluble cytochrome b562 from Escherichia coli
Seq:
Struc:
128 a.a.
282 a.a.*
Protein chain
Pfam   ArchSchema ?
P35372  (OPRM_HUMAN) -  Mu-type opioid receptor from Homo sapiens
Seq:
Struc:
400 a.a.
282 a.a.*
Protein chain
Pfam   ArchSchema ?
P08754  (GNAI3_HUMAN) -  Guanine nucleotide-binding protein G(i) subunit alpha-3 from Homo sapiens
Seq:
Struc:
354 a.a.
224 a.a.
Protein chain
Pfam   ArchSchema ?
P62873  (GBB1_HUMAN) -  Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 from Homo sapiens
Seq:
Struc:
340 a.a.
339 a.a.
Protein chain
Pfam   ArchSchema ?
P59768  (GBG2_HUMAN) -  Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 from Homo sapiens
Seq:
Struc:
71 a.a.
59 a.a.
Protein chain
No UniProt id for this chain
Struc: 235 a.a.
Key:    PfamA domain  Secondary structure
* PDB and UniProt seqs differ at 116 residue positions (black crosses)

 

 

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