PDBsum entry 7z8b

Pore analysis for: 7z8b calculated with

MOLE 2.0

PDB id

7z8b

Pores calculated on whole structure

Pores calculated excluding ligands

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18 pores, coloured by radius

18 pores, coloured by radius

18 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.46

1.55

27.5

-0.80

-0.42

13.5

86

2

2

3

5

1

2

0

2

1.90

3.12

38.6

0.71

0.24

8.6

73

2

2

2

5

3

0

2

3

2.39

2.39

51.2

-1.89

-0.45

16.5

87

3

2

6

2

1

1

0

4

1.48

1.55

59.2

-1.73

-0.65

18.3

89

2

6

8

2

1

3

0

5

1.89

1.90

64.1

-1.23

-0.32

17.3

86

6

3

7

8

4

1

1

6

1.49

2.90

68.5

-0.99

-0.32

17.6

86

7

5

5

10

3

1

3

7

1.24

1.34

102.1

-0.39

-0.10

11.8

75

5

4

8

13

1

3

0

8

1.35

1.53

120.0

-0.86

-0.24

14.0

80

8

4

14

14

4

4

0

9

2.09

2.08

123.2

-2.10

-0.50

18.8

83

6

7

18

6

4

1

0

10

1.40

1.46

129.1

-1.78

-0.44

14.9

83

5

7

17

8

5

2

0

11

1.81

2.12

131.4

-1.60

-0.45

23.7

83

7

7

5

8

1

3

0

12

1.59

1.62

132.9

0.21

0.06

9.7

81

9

6

10

24

3

10

0

13

1.57

1.55

150.6

0.28

0.04

8.4

79

9

5

11

29

2

11

3

14

1.71

1.70

146.3

-2.31

-0.64

21.9

80

11

8

10

4

0

4

0

15

1.41

1.70

166.7

-0.90

-0.12

18.3

78

13

8

10

15

5

1

0

16

1.18

1.40

169.5

-0.74

-0.19

14.5

75

7

5

9

14

1

3

0

17

1.88

1.99

178.3

-1.65

-0.38

20.1

80

12

8

10

7

3

6

1

18

1.24

2.77

37.6

1.16

0.38

1.5

72

0

0

2

7

1

0

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.