 |
PDBsum entry 7z6h
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 7z6h calculated with MOLE 2.0
|
PDB id
|
|
|
|
7z6h
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
24 pores,
coloured by radius |
 |
23 pores,
coloured by radius
|
23 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.24 |
1.38 |
25.1 |
-2.21 |
-0.50 |
19.8 |
78 |
 |
3 |
1 |
5 |
0 |
1 |
2 |
1 |
 |
|
 |
 |
2 |
 |
1.31 |
2.74 |
25.8 |
0.38 |
0.19 |
11.3 |
79 |
1 |
3 |
3 |
6 |
1 |
1 |
0 |
|
 |
3 |
 |
1.49 |
1.74 |
51.9 |
-1.20 |
-0.43 |
19.5 |
81 |
5 |
4 |
3 |
5 |
0 |
1 |
0 |
|
 |
4 |
 |
1.34 |
1.42 |
82.4 |
-1.28 |
-0.23 |
19.6 |
74 |
9 |
5 |
3 |
6 |
5 |
1 |
0 |
AGS 401 D
|
 |
5 |
 |
1.31 |
1.42 |
108.8 |
-1.84 |
-0.41 |
22.4 |
84 |
14 |
10 |
6 |
9 |
2 |
4 |
0 |
AGS 401 D DG 62 X
|
 |
6 |
 |
1.60 |
1.77 |
111.6 |
-1.41 |
-0.50 |
18.3 |
83 |
6 |
10 |
8 |
9 |
2 |
2 |
0 |
DG 62 X DT 63 X DT 64 X DG 65 X
|
 |
7 |
 |
1.38 |
1.44 |
116.3 |
-2.01 |
-0.46 |
24.5 |
85 |
14 |
11 |
9 |
8 |
1 |
4 |
0 |
AGS 701 K
|
 |
8 |
 |
1.25 |
1.34 |
121.0 |
-1.33 |
-0.35 |
21.9 |
81 |
9 |
11 |
8 |
8 |
3 |
2 |
0 |
DA 69 X
|
 |
9 |
 |
1.26 |
2.80 |
126.0 |
-0.54 |
0.01 |
8.9 |
86 |
4 |
2 |
10 |
10 |
2 |
2 |
0 |
DC 51 X DG 52 X DG 53 X DG 54 X
|
 |
10 |
 |
1.41 |
1.49 |
133.9 |
-1.61 |
-0.52 |
23.5 |
84 |
8 |
12 |
4 |
6 |
1 |
4 |
0 |
DA 66 X DC 67 X DA 68 X DA 69 X
|
 |
11 |
 |
1.15 |
1.36 |
135.5 |
-0.57 |
-0.06 |
18.0 |
80 |
8 |
9 |
8 |
12 |
4 |
4 |
0 |
DA 69 X
|
 |
12 |
 |
1.41 |
2.78 |
138.3 |
-1.39 |
-0.37 |
19.2 |
82 |
10 |
8 |
8 |
9 |
3 |
2 |
1 |
|
 |
13 |
 |
1.44 |
1.53 |
145.1 |
-1.25 |
-0.40 |
19.9 |
82 |
6 |
13 |
10 |
8 |
3 |
2 |
0 |
DA 69 X
|
 |
14 |
 |
1.39 |
1.50 |
159.1 |
-1.40 |
-0.38 |
21.3 |
81 |
9 |
16 |
11 |
10 |
4 |
2 |
0 |
DA 69 X
|
 |
15 |
 |
1.16 |
1.34 |
160.9 |
-1.21 |
-0.33 |
17.4 |
83 |
11 |
6 |
7 |
8 |
1 |
1 |
0 |
|
 |
16 |
 |
1.31 |
2.93 |
161.9 |
-1.64 |
-0.34 |
23.3 |
81 |
17 |
10 |
7 |
12 |
3 |
3 |
1 |
AGS 401 D
|
 |
17 |
 |
1.58 |
2.67 |
171.7 |
-1.43 |
-0.48 |
18.8 |
86 |
12 |
11 |
9 |
14 |
0 |
4 |
1 |
DG 62 X DT 63 X DT 64 X DG 65 X
|
 |
18 |
 |
1.37 |
2.59 |
192.4 |
-1.77 |
-0.47 |
24.5 |
82 |
16 |
18 |
10 |
10 |
4 |
3 |
0 |
AGS 401 D DA 69 X
|
 |
19 |
 |
1.28 |
1.27 |
221.2 |
-1.52 |
-0.40 |
21.0 |
81 |
14 |
14 |
10 |
10 |
5 |
2 |
0 |
DA 69 X
|
 |
20 |
 |
1.47 |
1.65 |
205.3 |
-1.44 |
-0.44 |
20.9 |
85 |
12 |
15 |
11 |
13 |
1 |
4 |
1 |
DA 69 X
|
 |
21 |
 |
1.17 |
1.23 |
206.5 |
-1.76 |
-0.44 |
24.3 |
81 |
19 |
21 |
12 |
12 |
5 |
3 |
0 |
AGS 401 D DA 69 X
|
 |
22 |
 |
1.33 |
1.23 |
219.3 |
-1.50 |
-0.42 |
21.3 |
84 |
15 |
18 |
13 |
15 |
2 |
4 |
1 |
DA 69 X
|
 |
23 |
 |
1.28 |
1.29 |
299.0 |
-1.51 |
-0.45 |
20.5 |
84 |
19 |
17 |
13 |
14 |
3 |
5 |
1 |
DA 69 X
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |