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PDBsum entry 7yk6

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 7yk6 calculated with MOLE 2.0 PDB id
7yk6
Pores calculated on whole structure Pores calculated excluding ligands

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6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.42 1.49 29.9 -0.35 0.19 11.8 62 2 0 2 3 6 0 0  IYF 601 R
2 1.39 1.48 33.0 -0.13 0.28 12.8 67 2 1 2 4 5 0 0  IYF 601 R
3 1.38 1.49 33.5 -0.08 0.25 10.0 65 3 1 2 4 4 1 0  
4 1.46 2.74 37.6 -0.38 0.14 8.4 68 3 0 3 5 5 1 0  IYF 601 R
5 1.47 1.69 39.4 -1.94 -0.39 10.8 87 2 1 5 1 2 0 0  
6 2.40 2.65 51.8 -1.22 -0.37 14.7 83 5 3 5 3 2 1 2  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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