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PDBsum entry 7y27

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 7y27 calculated with MOLE 2.0 PDB id
7y27
Pores calculated on whole structure Pores calculated excluding ligands

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14 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.00 3.00 30.0 -1.58 -0.52 18.4 89 5 4 3 3 1 0 0  
2 1.53 1.64 36.1 -1.51 -0.30 14.3 83 2 2 4 1 4 0 0  
3 1.54 1.64 41.9 -1.44 -0.20 11.8 89 4 1 5 1 3 0 0  
4 1.21 1.21 46.3 2.03 0.83 4.5 77 2 1 2 10 5 0 0  
5 1.14 2.08 53.0 0.19 0.15 12.3 85 7 4 2 9 2 0 1  
6 1.20 1.44 74.5 0.57 0.24 14.5 83 5 6 3 13 4 0 0  
7 2.15 3.12 88.9 -1.35 -0.40 15.3 87 10 6 9 4 4 0 0  
8 1.29 1.31 92.6 0.62 0.31 13.8 84 5 7 3 18 4 0 0  
9 1.19 1.71 103.9 -0.62 -0.15 11.3 73 5 2 3 10 5 4 1  
10 1.17 1.16 103.5 -1.13 -0.26 22.4 82 6 7 4 5 4 0 1  
11 1.20 2.19 115.9 -0.37 -0.04 13.9 86 12 5 7 12 4 0 1  
12 1.31 1.32 131.8 -0.62 -0.08 20.1 83 8 10 5 11 4 0 1  
13 1.20 1.81 148.6 -0.56 -0.24 11.4 82 8 6 10 15 6 2 2  
14 1.23 1.41 157.9 -0.85 -0.34 13.4 81 12 6 8 12 4 2 3  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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