spacer
spacer

PDBsum entry 7xn4

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 7xn4 calculated with MOLE 2.0 PDB id
7xn4
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
10 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.40 3.46 25.7 -1.26 -0.38 14.8 89 2 2 6 2 2 0 0  
2 1.12 1.13 28.4 -0.31 -0.46 7.9 88 2 1 2 3 0 1 0  
3 2.23 2.81 36.6 -1.22 -0.52 17.2 92 4 1 5 1 2 0 0  
4 3.32 3.84 38.0 -1.79 -0.61 20.6 91 5 3 6 2 1 0 0  
5 1.62 1.91 45.1 -1.12 -0.27 14.0 86 4 1 6 1 5 0 0  
6 1.62 1.89 48.5 -1.72 -0.44 18.6 87 6 3 7 3 2 0 0  
7 1.62 1.91 50.7 -2.09 -0.53 23.5 89 6 2 4 2 1 0 0  
8 1.20 2.09 57.4 -0.80 -0.10 14.2 84 4 4 5 2 5 0 0  
9 1.23 2.08 67.9 -1.64 -0.41 22.2 87 7 5 5 3 2 0 0  
10 1.29 2.17 118.8 -1.62 -0.40 21.1 83 8 4 4 5 3 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer