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PDBsum entry 7xk9

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 7xk9 calculated with MOLE 2.0 PDB id
7xk9
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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8 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.44 1.44 25.4 0.17 0.19 9.5 74 1 3 3 2 8 0 3  GJ6 1401 A NA 1402 A
2 1.80 1.92 39.1 -0.08 0.34 15.4 78 4 2 3 5 8 0 0  GJ6 1401 A
3 1.78 2.71 41.7 -0.38 0.01 17.4 79 4 5 2 4 6 0 3  GJ6 1401 A
4 1.82 1.96 43.6 -0.02 0.33 17.5 78 5 5 2 8 7 0 1  GJ6 1401 A
5 1.28 1.28 15.6 -0.07 -0.03 6.0 90 2 0 2 5 3 0 1  
6 1.45 1.45 18.3 -1.62 -0.48 16.0 82 3 3 3 1 4 0 1  
7 1.41 1.41 20.8 -1.02 -0.17 10.4 76 1 3 3 2 5 1 1  
8 1.27 1.27 22.4 -0.87 -0.18 11.9 83 5 0 2 3 3 0 1  
9 0.99 0.99 32.2 -0.31 -0.09 16.2 69 3 3 0 2 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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