 |
PDBsum entry 7x9c
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 7x9c calculated with  MOLE 2.0
|
PDB id
|
|
|
|
7x9c
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
9 pores,
coloured by radius |
|
9 pores,
coloured by radius
|
9 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.85 |
3.32 |
25.6 |
0.41 |
-0.09 |
10.4 |
87 |
|
2 |
1 |
1 |
6 |
1 |
0 |
0 |
|
|
 |
|
2 |
 |
1.31 |
1.41 |
32.9 |
0.05 |
0.13 |
16.5 |
74 |
2 |
1 |
0 |
5 |
1 |
2 |
0 |
|
|
3 |
 |
2.87 |
3.38 |
35.0 |
-0.37 |
-0.34 |
13.0 |
92 |
2 |
1 |
3 |
6 |
0 |
0 |
0 |
|
|
4 |
 |
1.01 |
1.87 |
37.5 |
0.62 |
0.35 |
8.0 |
78 |
2 |
1 |
3 |
8 |
3 |
1 |
0 |
|
|
5 |
 |
2.87 |
3.36 |
40.1 |
-1.93 |
-0.65 |
22.7 |
87 |
6 |
4 |
3 |
3 |
1 |
0 |
0 |
|
|
6 |
 |
2.87 |
3.72 |
44.0 |
-0.95 |
-0.39 |
18.9 |
87 |
5 |
5 |
3 |
4 |
1 |
0 |
0 |
|
|
7 |
 |
2.36 |
3.55 |
50.5 |
-1.09 |
-0.42 |
16.1 |
77 |
7 |
3 |
4 |
3 |
4 |
2 |
3 |
|
|
8 |
 |
1.97 |
3.52 |
67.9 |
-1.30 |
-0.53 |
20.6 |
86 |
6 |
7 |
2 |
5 |
0 |
1 |
0 |
|
 |
9 |
 |
1.22 |
1.75 |
25.8 |
-1.74 |
-0.66 |
13.6 |
81 |
2 |
0 |
2 |
1 |
0 |
0 |
1 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program