 |
PDBsum entry 7x7d
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 7x7d calculated with  MOLE 2.0
|
PDB id
|
|
|
|
7x7d
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
4 tunnels,
coloured by tunnel radius |
|
4 tunnels,
coloured by
tunnel radius
|
4 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.35 |
1.76 |
17.5 |
-0.77 |
-0.03 |
3.8 |
76 |
|
1 |
0 |
4 |
1 |
3 |
2 |
0 |
|
|
 |
|
2 |
 |
1.36 |
1.62 |
19.3 |
-0.60 |
0.00 |
4.2 |
77 |
1 |
0 |
4 |
2 |
3 |
2 |
0 |
|
|
3 |
 |
1.55 |
1.72 |
19.7 |
-1.17 |
0.17 |
10.8 |
60 |
3 |
0 |
0 |
1 |
5 |
1 |
0 |
|
 |
4 |
 |
1.13 |
1.30 |
19.8 |
-0.15 |
-0.14 |
12.9 |
85 |
3 |
1 |
1 |
4 |
1 |
0 |
1 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program