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PDBsum entry 7vug

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 7vug calculated with MOLE 2.0 PDB id
7vug
Pores calculated on whole structure Pores calculated excluding ligands

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7 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.43 1.58 62.4 -1.52 -0.46 20.4 82 12 5 3 4 1 0 0  
2 1.36 2.84 88.8 -0.33 0.09 14.4 79 3 2 2 9 2 2 1  
3 1.40 1.47 111.4 -1.39 -0.45 19.3 86 12 5 7 4 3 2 1  
4 2.00 2.26 189.4 -1.51 -0.38 19.8 85 21 8 11 10 3 2 1  
5 1.53 1.63 220.4 -0.18 0.22 14.1 80 8 5 3 18 9 1 0  
6 1.85 2.16 274.4 -0.46 0.02 14.3 80 14 6 5 21 11 1 0  
7 1.68 1.78 354.6 -0.83 -0.07 16.2 84 18 6 12 25 11 3 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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