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PDBsum entry 7vsd
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Tunnel analysis for: 7vsd calculated with  MOLE 2.0
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PDB id
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7vsd
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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2 tunnels,
coloured by tunnel radius |
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4 tunnels,
coloured by
tunnel radius
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4 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.51 |
1.79 |
23.6 |
-0.95 |
0.22 |
13.4 |
75 |
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3 |
2 |
3 |
3 |
4 |
0 |
0 |
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SO4 201 A
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2 |
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1.35 |
1.75 |
25.4 |
-2.02 |
-0.18 |
17.7 |
70 |
4 |
1 |
2 |
1 |
4 |
1 |
0 |
SO4 201 B
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3 |
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1.51 |
1.71 |
31.3 |
-2.69 |
-0.29 |
12.3 |
80 |
4 |
2 |
7 |
1 |
4 |
0 |
0 |
SO4 201 A MG 202 A
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4 |
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1.21 |
1.42 |
38.6 |
-1.87 |
-0.48 |
20.5 |
78 |
4 |
3 |
2 |
3 |
4 |
0 |
0 |
SO4 201 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program