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PDBsum entry 7vq2

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Pore analysis for: 7vq2 calculated with MOLE 2.0 PDB id
7vq2
Pores calculated on whole structure Pores calculated excluding ligands

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27 pores, coloured by radius 27 pores, coloured by radius 27 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.20 2.77 34.2 0.20 0.05 10.4 83 3 0 2 8 1 0 0  
2 1.46 1.92 38.9 1.14 0.66 4.5 72 0 2 2 6 5 1 1  
3 2.32 3.09 44.7 1.20 0.82 7.5 67 4 0 1 5 6 1 1  
4 1.28 3.46 50.4 -0.74 0.09 18.4 75 5 5 2 5 4 2 0  
5 1.27 3.51 51.3 -0.77 0.03 18.1 74 4 5 2 5 4 2 0  
6 1.21 2.77 58.9 1.64 0.80 5.1 72 3 0 1 11 8 1 1  
7 1.60 1.79 66.5 -0.45 0.30 15.6 69 3 6 2 6 6 2 1  
8 1.45 1.88 74.0 0.11 0.29 12.5 69 2 8 3 10 9 1 1  
9 1.48 1.88 76.7 1.68 0.84 5.7 72 4 2 2 14 10 0 2  
10 2.30 2.42 77.5 0.71 0.46 11.9 71 3 6 5 15 8 2 2  
11 1.27 1.83 81.8 1.62 0.73 5.2 70 5 0 3 19 8 1 2  
12 1.43 1.63 82.2 2.15 0.95 1.9 65 2 0 2 16 10 1 2  
13 1.98 2.38 83.8 2.73 0.92 0.6 72 0 0 6 24 6 2 4  
14 1.84 2.95 85.6 -1.16 -0.20 21.7 84 6 7 6 5 2 1 0  
15 1.17 1.17 94.5 1.42 0.66 6.1 76 7 1 4 14 12 0 1  
16 1.43 1.63 94.1 1.85 0.90 3.8 66 4 0 2 17 10 1 2  
17 1.85 2.29 101.6 2.65 0.96 1.6 71 3 0 6 27 9 1 4  
18 1.44 1.47 101.6 0.98 0.56 9.3 70 3 5 5 22 12 0 2  
19 1.32 2.14 109.5 -0.49 -0.07 16.1 83 7 6 8 12 3 1 0  
20 1.22 2.77 112.4 0.00 0.12 12.4 83 9 3 6 14 3 0 0  
21 1.43 1.63 121.9 1.16 0.58 7.6 66 3 6 3 21 11 2 4  
22 1.20 2.79 122.2 -0.17 0.04 13.0 83 10 2 7 17 3 0 0  
23 1.92 2.35 131.3 2.41 0.94 3.2 70 7 0 6 30 12 0 4  
24 1.32 1.83 136.1 2.16 0.79 3.3 73 3 0 7 34 11 1 4  
25 1.41 1.61 136.5 1.54 0.66 7.5 67 3 6 5 30 14 2 5  
26 1.35 1.47 143.8 1.58 0.74 6.9 66 5 3 5 30 16 0 3  
27 1.20 2.90 144.8 0.94 0.51 7.1 71 7 2 6 29 12 0 2  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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