 |
PDBsum entry 7ut7
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 7ut7 calculated with MOLE 2.0
|
PDB id
|
|
|
|
7ut7
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
12 tunnels,
coloured by tunnel radius |
 |
16 tunnels,
coloured by
tunnel radius
|
16 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.32 |
1.44 |
58.8 |
-0.86 |
-0.10 |
16.0 |
76 |
 |
7 |
1 |
3 |
6 |
7 |
0 |
1 |
 |
HCA 501 A ICS 502 A
|
 |
 |
2 |
 |
1.13 |
1.12 |
55.7 |
-1.40 |
-0.29 |
17.1 |
83 |
6 |
3 |
5 |
6 |
5 |
0 |
0 |
HCA 501 C
|
 |
3 |
 |
1.14 |
1.61 |
33.1 |
0.23 |
-0.14 |
5.8 |
70 |
1 |
2 |
2 |
1 |
3 |
1 |
4 |
CLF 602 D
|
 |
4 |
 |
1.29 |
1.45 |
34.7 |
-0.49 |
-0.34 |
7.0 |
74 |
1 |
1 |
5 |
0 |
3 |
1 |
4 |
CLF 602 D
|
 |
5 |
 |
1.11 |
1.52 |
24.5 |
1.05 |
0.25 |
4.8 |
70 |
1 |
1 |
1 |
5 |
3 |
0 |
0 |
|
 |
6 |
 |
1.10 |
1.58 |
32.3 |
0.63 |
0.25 |
7.7 |
72 |
3 |
1 |
1 |
8 |
5 |
1 |
0 |
|
 |
7 |
 |
1.28 |
1.44 |
22.2 |
0.00 |
-0.06 |
11.4 |
69 |
3 |
1 |
0 |
5 |
1 |
2 |
0 |
|
 |
8 |
 |
1.28 |
1.43 |
22.0 |
0.00 |
-0.06 |
11.4 |
69 |
3 |
1 |
0 |
5 |
1 |
2 |
0 |
|
 |
9 |
 |
1.30 |
1.40 |
31.2 |
-0.20 |
-0.26 |
5.0 |
71 |
1 |
1 |
3 |
0 |
3 |
1 |
4 |
CLF 602 B
|
 |
10 |
 |
1.23 |
2.21 |
16.3 |
-1.29 |
-0.38 |
15.4 |
89 |
2 |
2 |
1 |
2 |
0 |
1 |
0 |
|
 |
11 |
 |
1.22 |
1.40 |
17.6 |
1.46 |
0.42 |
8.3 |
87 |
1 |
1 |
0 |
6 |
0 |
0 |
0 |
|
 |
12 |
 |
1.21 |
1.37 |
15.2 |
-1.04 |
-0.70 |
9.9 |
88 |
1 |
1 |
2 |
1 |
0 |
0 |
0 |
|
 |
13 |
 |
2.02 |
2.77 |
15.6 |
-1.26 |
0.22 |
13.7 |
77 |
3 |
0 |
2 |
2 |
2 |
0 |
0 |
|
 |
14 |
 |
1.68 |
1.68 |
16.0 |
-2.21 |
0.04 |
20.6 |
77 |
4 |
1 |
2 |
0 |
2 |
0 |
0 |
|
 |
15 |
 |
1.20 |
2.24 |
17.6 |
1.47 |
0.58 |
1.4 |
84 |
0 |
0 |
0 |
5 |
1 |
0 |
1 |
|
 |
16 |
 |
1.21 |
1.21 |
16.7 |
0.46 |
0.05 |
6.1 |
79 |
0 |
1 |
1 |
4 |
3 |
0 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |