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PDBsum entry 7um6

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 7um6 calculated with MOLE 2.0 PDB id
7um6
Pores calculated on whole structure Pores calculated excluding ligands

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10 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.68 2.71 25.5 -0.28 -0.23 16.1 85 5 2 0 6 0 0 0  
2 2.67 2.72 26.6 -1.45 -0.63 19.7 91 3 3 2 3 0 0 0  
3 1.41 2.84 26.6 0.42 0.23 14.2 77 2 2 2 5 2 1 0  H8G 401 A
4 2.49 2.72 34.0 -0.63 -0.30 11.0 91 2 2 5 4 0 0 0  
5 2.10 2.31 36.0 -0.15 -0.24 12.6 88 3 3 1 8 0 0 0  
6 1.70 1.79 36.5 -0.48 -0.28 16.1 78 3 1 2 6 0 0 0  H8G 401 A
7 2.49 2.71 37.9 0.77 0.07 9.1 85 4 1 1 8 0 0 0  
8 1.20 1.43 43.2 1.41 0.72 7.4 67 0 2 1 10 4 1 1  H8G 401 A
9 1.70 1.69 72.9 -1.73 -0.35 15.7 88 5 4 8 3 3 0 0  
10 2.05 2.06 136.0 -1.24 -0.51 14.8 85 9 5 7 7 1 1 3  
11 0.69 2.89 143.5 0.32 0.39 8.4 76 6 2 8 24 9 1 3  H8G 401 A
12 0.71 2.95 160.1 0.47 0.36 7.5 78 8 3 10 24 10 2 2  H8G 401 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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