PDBsum entry 7udh Go to PDB code:  Tunnel analysis for: 7udh calculated with MOLE 2.0 PDB id 7udh Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.14 2.68 23.4 -0.67 0.42 6.3 71 1 1 2 2 4 0 0  SO4 508 A 2 1.38 1.43 26.3 -0.69 -0.43 10.7 95 2 0 3 6 0 1 0   3 1.13 1.14 33.4 -1.23 -0.38 15.6 91 3 0 7 5 2 2 0   4 1.33 1.33 15.5 0.38 -0.19 4.7 68 0 1 1 3 0 1 2   5 1.18 2.62 17.7 2.23 0.86 0.9 85 0 0 3 6 1 0 0   6 1.20 1.20 18.0 2.24 0.58 1.0 91 0 0 3 6 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.