PDBsum entry 7u3d Go to PDB code:  Pore analysis for: 7u3d calculated with MOLE 2.0 PDB id 7u3d Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   22 pores, coloured by radius 33 pores, coloured by radius 33 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.32 3.88 33.1 -1.42 -0.02 18.9 80 4 3 2 5 2 1 0   2 2.60 3.30 51.5 -2.59 -0.46 28.5 81 7 4 4 3 2 0 0   3 1.47 1.70 55.6 -2.35 -0.57 25.0 83 9 5 4 2 1 1 0  C2E 801 F 4 1.44 1.67 66.8 -2.75 -0.60 28.5 83 11 4 4 1 1 0 0  C2E 801 A 5 1.14 1.30 72.1 -2.49 -0.61 25.6 82 10 5 4 1 2 0 0  C2E 801 F 6 2.30 2.44 74.3 -1.28 -0.16 11.2 78 2 4 8 9 4 1 0   7 2.59 3.36 81.4 -1.82 -0.44 19.8 81 7 8 5 6 2 4 0   8 3.55 3.55 88.6 -2.17 -0.60 23.6 83 10 11 4 3 1 5 0   9 1.41 1.61 89.6 -1.72 -0.34 15.3 80 6 4 8 7 3 1 0  C2E 801 A 10 2.14 2.83 89.3 -1.42 -0.27 14.7 79 6 7 8 9 5 4 0   11 2.23 2.30 89.9 -1.92 -0.34 19.9 83 9 8 5 9 2 1 0   12 1.52 1.67 96.7 -2.15 -0.55 22.4 82 11 8 5 4 2 4 0  C2E 801 A 13 2.19 3.15 96.6 -1.82 -0.44 18.4 80 9 10 7 6 4 5 0   14 1.49 1.73 98.9 -1.77 -0.41 18.4 81 10 6 6 6 4 4 0  C2E 801 B 15 1.48 1.71 99.6 -1.82 -0.47 18.8 81 9 7 6 6 3 3 0  C2E 801 F 16 1.39 1.58 101.0 -1.91 -0.40 17.5 82 10 7 9 8 4 0 0  C2E 801 B 17 1.40 1.61 102.4 -2.12 -0.55 22.1 81 13 9 5 3 3 5 0  C2E 801 B 18 1.49 1.72 104.6 -1.77 -0.40 17.6 79 10 7 8 7 5 4 0  C2E 801 A 19 1.45 1.71 114.2 -2.07 -0.52 20.7 82 14 6 6 4 4 4 0  C2E 801 A C2E 801 B 20 1.54 1.70 115.8 -2.07 -0.58 22.6 83 13 11 5 4 2 5 0  C2E 801 F 21 1.45 1.68 121.4 -2.10 -0.56 21.5 81 13 8 5 4 3 3 0  C2E 801 A C2E 801 F 22 1.40 1.65 124.1 -2.06 -0.56 21.7 83 15 7 6 4 3 3 0  C2E 801 B C2E 801 F 23 1.49 1.62 125.0 -1.73 -0.54 17.4 84 8 12 11 7 4 4 0  GLC 1 D GLC 2 D AC1 3 D 24 2.23 2.85 137.0 -1.71 -0.47 18.7 81 12 9 10 9 4 3 0   25 1.72 1.95 143.1 -1.75 -0.47 17.6 80 8 13 7 5 4 4 0  GLC 1 H GLC 2 H AC1 3 H 26 1.66 1.83 145.4 -1.98 -0.61 21.1 83 16 9 8 6 2 2 0  C2E 801 F 27 1.46 1.54 150.3 -1.56 -0.42 16.0 82 8 13 13 14 6 3 0  GLC 1 D GLC 2 D AC1 3 D 28 1.79 2.30 155.4 -1.26 -0.30 13.0 79 7 13 11 14 7 3 0  GLC 1 H GLC 2 H AC1 3 H 29 1.45 1.52 154.8 -1.47 -0.41 16.9 82 9 12 10 13 7 6 0  GLC 1 D GLC 2 D AC1 3 D 30 1.46 1.53 163.6 -1.68 -0.46 18.1 82 12 12 10 10 6 7 0  C2E 801 A GLC 1 D GLC 2 D AC1 3 D 31 1.71 2.79 42.3 -1.91 -0.62 19.3 83 2 6 2 2 2 0 0  GLC 1 J GLC 2 J AC1 3 J 32 1.18 1.18 25.7 0.02 -0.39 5.1 82 1 1 1 5 0 2 0   33 1.18 1.18 25.9 -0.05 -0.41 4.0 82 1 0 1 5 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.