PDBsum entry 7trh Go to PDB code:  Tunnel analysis for: 7trh calculated with MOLE 2.0 PDB id 7trh Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.33 1.42 18.0 -0.15 -0.45 8.9 85 1 2 2 3 0 1 0   2 1.33 1.43 21.6 -0.26 -0.43 10.1 82 1 1 1 3 0 1 0   3 1.28 1.46 24.3 0.07 -0.31 6.1 81 2 1 2 3 1 1 0   4 1.19 1.19 17.5 -1.24 -0.27 16.0 75 1 2 1 2 2 1 0   5 1.19 1.19 21.2 -1.40 -0.32 14.3 72 3 1 0 1 2 1 0   6 1.19 1.19 23.4 -1.56 -0.24 13.5 62 4 0 0 0 4 1 0   7 1.12 2.49 18.7 -0.51 0.22 14.2 60 2 0 1 1 1 0 2   8 1.78 2.04 20.3 -0.49 0.14 13.6 61 2 0 0 1 1 0 2   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.