spacer
spacer

PDBsum entry 7tkc

Go to PDB code: 
Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 7tkc calculated with MOLE 2.0 PDB id
7tkc
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.80 1.80 29.8 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  
2 2.15 2.15 74.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  
3 3.22 3.22 75.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  
4 2.12 2.12 84.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  
5 2.28 2.28 84.2 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  
6 2.65 2.65 84.5 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  
7 2.19 2.19 87.2 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  
8 2.56 2.56 93.8 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  
9 2.78 2.78 95.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  
10 2.54 2.54 94.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  
11 2.55 2.55 99.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  
12 4.05 4.05 102.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  
13 2.53 2.53 105.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  
14 2.34 2.34 106.8 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  
15 2.24 2.24 108.8 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  
16 2.86 2.86 110.1 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  
17 2.19 2.19 118.5 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  
18 2.15 2.15 121.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  
19 2.33 2.33 131.1 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  
20 2.15 2.15 132.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  
21 2.22 2.22 138.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  
22 2.77 2.77 142.1 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  
23 2.27 2.27 145.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  
24 1.63 1.63 153.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  
25 2.27 2.27 156.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  
26 1.67 1.67 190.2 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  
27 1.66 1.66 201.2 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  
28 2.37 2.37 213.8 -0.38 -0.79 3.4 93 0 0 0 1 0 0 0  
29 1.33 1.33 266.6 -0.39 -0.79 3.4 93 0 0 0 1 0 0 0  
30 1.33 1.33 277.6 -0.39 -0.79 3.4 93 0 0 0 1 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer