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PDBsum entry 7so7

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 7so7 calculated with MOLE 2.0 PDB id
7so7
Pores calculated on whole structure Pores calculated excluding ligands

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12 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.31 1.38 45.5 -1.90 -0.75 15.2 90 4 4 6 0 0 1 0  
2 2.30 2.36 66.6 -1.20 -0.10 15.5 84 3 4 9 3 4 1 0  
3 2.30 2.36 91.8 -1.60 -0.43 19.3 85 4 6 6 5 3 0 0  
4 2.11 2.15 97.8 -1.02 -0.29 16.9 84 3 9 11 9 3 2 0  
5 2.07 2.14 99.6 -1.53 -0.34 19.4 86 6 8 13 6 4 1 0  
6 2.07 2.14 106.3 -1.33 -0.52 21.5 85 3 10 7 9 2 1 0  
7 1.96 1.96 132.2 -1.24 -0.59 12.8 94 3 7 15 3 4 0 0  
8 2.48 3.88 43.3 -0.89 -0.42 11.7 82 3 2 2 3 1 1 1  
9 2.18 2.94 84.4 -1.90 -0.50 17.4 84 2 6 8 0 5 1 0  
10 1.95 2.62 27.2 -0.61 -0.12 8.8 66 0 1 0 3 1 5 0  
11 2.10 2.19 39.7 -0.77 -0.47 11.3 88 2 1 3 2 0 2 1  
12 1.19 3.25 45.2 0.43 -0.10 4.9 79 2 0 2 4 1 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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