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PDBsum entry 7s3h

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Pore analysis for: 7s3h calculated with MOLE 2.0 PDB id
7s3h
Pores calculated on whole structure Pores calculated excluding ligands

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15 pores, coloured by radius 15 pores, coloured by radius 15 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.28 1.32 27.9 0.49 0.31 15.9 76 3 2 0 5 2 1 0  
2 1.23 1.23 28.1 -2.02 -0.71 16.3 90 4 1 4 0 0 0 0  DA 10 N DG 11 N DA 12 N DC 17 T DT 23 T
3 1.23 1.23 30.4 -2.15 -0.75 18.4 86 4 3 4 0 0 0 0  DG 11 N DA 12 N DT 23 T
4 1.99 1.99 49.7 -1.76 -0.74 19.1 89 4 3 3 1 0 0 0  DA 10 N DG 11 N DA 19 N DA 20 N DT 14 T DC 15 T
DT 16 T DC 17 T
5 1.97 4.44 55.7 -2.63 -0.56 27.1 79 10 7 6 1 3 0 0  
6 1.78 1.78 58.7 -1.95 -0.32 25.9 77 9 4 2 1 6 1 0  A 75 R A 76 R
7 2.53 2.66 59.7 -1.98 -0.78 18.6 90 4 5 6 0 0 0 0  DA 12 N DT 13 N DG 14 N DA 15 N DA 19 N DA 20 N
DT 12 T DG 13 T DT 14 T DT 23 T
8 3.09 3.09 67.4 -1.48 -0.58 15.6 81 4 5 2 0 2 0 0  A 68 R A 69 R G 73 R A 75 R A 76 R A 77 R A 78 R
G 79 R
9 1.58 1.58 73.0 -2.04 -0.46 26.5 79 10 7 2 2 4 1 0  
10 1.35 1.55 74.6 -1.43 -0.69 16.5 88 4 4 4 6 0 1 0  DA 12 N DT 13 N DG 14 N DA 15 N A 68 R A 75 R A
76 R DT 12 T DG 13 T DT 14 T DT 23 T
11 2.10 2.19 74.5 -2.30 -0.70 20.2 86 5 8 8 3 0 2 0  
12 1.61 1.73 80.7 -1.38 -0.51 22.8 81 9 9 4 5 1 1 0  DT 23 T
13 2.03 2.60 99.6 -2.77 -0.69 29.9 86 14 11 10 2 0 0 0  
14 1.29 2.05 113.9 -1.82 -0.63 22.0 88 8 6 3 4 1 1 0  DA 10 N DG 11 N DG 13 T DT 14 T DC 15 T DT 16 T
DC 17 T
15 1.17 2.18 123.7 -1.75 -0.47 22.5 81 9 9 4 5 5 1 0  DG 13 T DT 14 T DC 15 T

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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