spacer
spacer

PDBsum entry 7qwz

Go to PDB code: 
Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 7qwz calculated with MOLE 2.0 PDB id
7qwz
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
11 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.51 2.47 29.5 -1.71 -0.58 17.8 79 4 3 2 2 3 1 0  
2 1.46 1.79 30.5 -2.14 -0.32 25.0 83 4 3 3 1 2 0 0  
3 1.50 1.66 31.5 0.00 0.09 13.3 80 4 1 3 4 1 1 0  
4 1.97 1.95 48.2 -1.58 -0.64 15.9 82 4 3 5 2 2 0 0  
5 1.48 2.16 58.4 -1.53 -0.50 15.9 82 3 5 5 3 3 1 0  
6 2.44 3.01 66.8 -2.00 -0.49 21.3 84 6 3 3 3 1 1 0  
7 1.25 1.30 123.5 -1.83 -0.46 14.8 80 5 8 9 1 7 3 0  
8 1.30 1.60 134.4 -1.36 -0.29 16.5 84 8 6 11 8 6 2 0  
9 1.23 1.32 141.8 -0.66 -0.08 14.0 78 5 7 5 7 11 1 0  
10 1.22 1.34 155.7 -0.84 -0.13 12.8 79 9 8 6 8 11 1 0  
11 1.75 1.77 199.7 -1.74 -0.57 19.0 85 7 8 8 8 2 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer