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PDBsum entry 7ql5

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 7ql5 calculated with MOLE 2.0 PDB id
7ql5
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 24 pores, coloured by radius 24 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.98 3.52 26.0 -0.19 0.17 13.9 91 2 1 5 7 1 0 0  
2 1.41 3.69 33.7 -1.74 -0.20 20.4 87 6 2 6 1 3 1 0  POV 603 A
3 2.74 2.82 42.8 -1.97 -0.65 20.7 87 3 6 9 3 1 1 0  
4 2.35 5.08 50.1 0.60 0.28 12.7 92 3 4 5 15 0 1 1  
5 1.54 3.46 50.4 -1.11 -0.23 18.2 84 4 4 5 4 2 3 0  POV 601 C
6 1.72 1.98 50.3 -2.10 -0.55 19.8 87 7 2 9 3 1 2 0  POV 602 A
7 1.54 3.58 51.7 -1.68 -0.28 22.7 84 6 5 5 4 3 2 0  POV 601 C
8 1.41 3.70 55.7 -1.48 -0.06 23.6 88 9 3 5 6 3 1 0  POV 603 A
9 1.71 1.98 60.0 -2.31 -0.61 23.5 86 8 6 9 5 0 3 0  POV 602 A
10 1.41 3.70 60.9 -1.93 -0.36 25.5 82 10 6 7 3 4 2 0  POV 603 A
11 1.71 1.98 64.6 0.15 0.25 13.7 91 8 2 6 14 0 2 1  POV 602 A
12 1.18 1.39 66.6 -1.08 -0.40 14.9 92 3 7 8 7 1 0 0  
13 1.54 3.32 72.3 -1.86 -0.33 22.8 84 11 6 7 5 2 4 0  POV 602 A POV 601 C
14 1.59 1.71 73.3 -1.72 -0.75 21.6 88 2 10 9 5 0 1 0  
15 1.17 1.39 75.3 -1.53 -0.52 15.8 92 3 7 9 5 1 1 0  
16 1.96 1.99 119.0 -0.06 -0.26 9.7 85 3 10 18 18 3 1 0  
17 1.58 1.69 126.9 -0.19 -0.29 11.3 86 4 11 19 18 3 0 0  
18 1.23 1.66 128.9 -0.10 -0.19 8.6 88 5 8 19 18 4 0 0  
19 1.27 1.25 143.7 -2.06 -0.52 24.8 85 10 16 14 6 3 2 0  
20 1.39 1.56 157.4 -1.76 -0.47 22.9 82 8 19 9 9 4 2 0  
21 1.21 1.21 199.6 -0.76 -0.23 16.5 84 15 17 20 21 6 3 0  POV 601 C
22 1.54 1.94 205.3 -0.22 -0.07 13.8 86 11 16 17 32 5 1 1  
23 1.21 1.21 205.9 -0.90 -0.23 17.8 84 18 16 21 19 8 2 0  POV 603 A
24 1.21 1.22 213.5 -0.96 -0.31 16.2 85 17 17 24 20 5 3 0  POV 602 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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