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PDBsum entry 7py3
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Pore analysis for: 7py3 calculated with MOLE 2.0
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PDB id
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7py3
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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38 pores,
coloured by radius |
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34 pores,
coloured by radius
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34 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.57 |
2.25 |
47.4 |
-1.16 |
-0.33 |
21.3 |
80 |
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3 |
6 |
3 |
5 |
1 |
2 |
0 |
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2 |
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1.12 |
1.20 |
56.5 |
-1.17 |
-0.50 |
13.2 |
85 |
3 |
2 |
5 |
3 |
1 |
0 |
0 |
DG 18 N
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3 |
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1.20 |
1.20 |
57.1 |
-1.93 |
-0.53 |
22.4 |
89 |
7 |
3 |
3 |
3 |
0 |
1 |
0 |
U 4 R C 5 R
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4 |
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1.17 |
2.56 |
70.2 |
0.15 |
-0.05 |
14.2 |
86 |
4 |
7 |
4 |
13 |
1 |
0 |
0 |
U 4 R C 5 R DG 24 T DC 25 T
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5 |
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3.68 |
3.67 |
71.4 |
-0.66 |
-0.44 |
11.9 |
89 |
4 |
4 |
3 |
8 |
0 |
1 |
0 |
DC 17 N DG 18 N DA 19 N U 4 R C 5 R DG 24 T DC 25 T DG 26 T DG 28 T DA 29 T DC 30 T
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6 |
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1.13 |
1.51 |
79.6 |
-1.24 |
-0.38 |
20.3 |
85 |
8 |
5 |
5 |
7 |
0 |
2 |
0 |
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7 |
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1.16 |
2.56 |
89.2 |
-0.43 |
-0.24 |
13.2 |
86 |
7 |
8 |
4 |
13 |
1 |
1 |
0 |
DC 17 N DG 18 N DA 19 N DG 26 T DG 28 T DA 29 T DC 30 T
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8 |
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1.19 |
3.04 |
127.1 |
-0.21 |
0.04 |
14.4 |
79 |
6 |
7 |
8 |
19 |
7 |
5 |
0 |
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9 |
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1.34 |
1.59 |
127.2 |
-1.14 |
-0.12 |
20.3 |
86 |
13 |
9 |
8 |
18 |
5 |
1 |
0 |
U 4 R C 5 R
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10 |
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1.20 |
1.23 |
135.4 |
-1.33 |
-0.19 |
21.4 |
86 |
14 |
7 |
7 |
18 |
5 |
2 |
0 |
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11 |
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1.75 |
2.01 |
150.2 |
-2.07 |
-0.66 |
23.5 |
82 |
14 |
12 |
9 |
5 |
2 |
7 |
0 |
DG 26 N DA 27 N U 4 R C 5 R C 8 R G 9 R G 10 R DG 16 T DA 17 T DC 18 T DC 20 T DG 21 T DC 22 T DC 23 T DG 24 T DC 25 T
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12 |
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1.73 |
2.12 |
154.6 |
-2.58 |
-0.71 |
28.0 |
83 |
17 |
12 |
7 |
2 |
1 |
6 |
0 |
DC 17 N DG 18 N DA 19 N DT 20 N DC 21 N DT 23 N DC 24 N DG 25 N DG 26 N DA 27 N DT 12 T DT 13 T DC 14 T DA 29 T DC 30 T
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13 |
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1.31 |
1.90 |
158.8 |
-1.17 |
-0.19 |
23.1 |
84 |
15 |
8 |
7 |
14 |
1 |
1 |
0 |
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14 |
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1.37 |
1.55 |
173.4 |
-1.61 |
-0.46 |
23.0 |
81 |
14 |
10 |
6 |
9 |
1 |
6 |
0 |
DC 17 N DG 18 N DA 19 N DT 20 N DC 21 N DT 23 N DC 24 N DG 25 N DG 26 N DA 27 N DT 12 T DT 13 T DC 14 T DA 29 T DC 30 T
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15 |
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1.30 |
1.60 |
174.3 |
-1.14 |
-0.40 |
18.6 |
79 |
11 |
10 |
7 |
13 |
2 |
7 |
0 |
DG 26 N DA 27 N U 4 R C 5 R C 8 R G 9 R G 10 R DG 16 T DA 17 T DC 18 T DC 20 T DG 21 T DC 22 T DC 23 T DG 24 T DC 25 T
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16 |
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1.24 |
1.26 |
187.8 |
-1.81 |
-0.35 |
22.6 |
84 |
20 |
10 |
10 |
15 |
4 |
3 |
0 |
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17 |
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1.13 |
2.86 |
184.9 |
-0.99 |
-0.20 |
17.6 |
79 |
12 |
9 |
7 |
14 |
7 |
8 |
0 |
DC 17 N DG 18 N DA 19 N DT 20 N DC 21 N DT 23 N DC 24 N DG 25 N DG 26 N DA 27 N DT 12 T DT 13 T DC 14 T DA 29 T DC 30 T
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18 |
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1.88 |
1.88 |
200.5 |
-2.08 |
-0.63 |
21.6 |
83 |
19 |
12 |
15 |
9 |
2 |
5 |
0 |
U 4 R C 5 R C 8 R G 9 R G 10 R G 14 R DA 17 T DC 18 T DC 20 T DG 21 T DC 22 T DC 23 T DG 24 T DC 25 T
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19 |
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1.89 |
1.89 |
207.7 |
-2.30 |
-0.64 |
23.8 |
84 |
20 |
14 |
16 |
8 |
1 |
5 |
0 |
DC 17 N DG 18 N DA 19 N DT 20 N G 9 R G 14 R DG 16 T DA 17 T DC 18 T DA 29 T DC 30 T
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20 |
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1.58 |
2.04 |
232.0 |
-2.46 |
-0.64 |
26.5 |
83 |
27 |
20 |
18 |
6 |
3 |
7 |
0 |
DG 26 N DA 27 N
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21 |
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1.03 |
1.24 |
237.9 |
-1.65 |
-0.55 |
22.1 |
86 |
12 |
21 |
17 |
14 |
4 |
1 |
0 |
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22 |
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1.14 |
1.89 |
249.1 |
-1.40 |
-0.32 |
19.5 |
80 |
21 |
18 |
17 |
19 |
8 |
9 |
0 |
DG 26 N DA 27 N
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23 |
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1.23 |
1.24 |
248.0 |
-1.87 |
-0.57 |
24.4 |
85 |
18 |
16 |
14 |
10 |
4 |
3 |
0 |
DC 17 N DG 18 N DA 19 N DT 20 N DC 21 N DT 23 N DC 24 N DG 25 N DG 26 N DA 27 N DT 12 T DT 13 T DC 14 T DA 29 T DC 30 T
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24 |
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1.45 |
1.42 |
254.1 |
-1.54 |
-0.42 |
21.2 |
83 |
21 |
13 |
13 |
18 |
2 |
6 |
0 |
DC 17 N DG 18 N DA 19 N DT 20 N G 9 R G 14 R DG 16 T DA 17 T DC 18 T DA 29 T DC 30 T
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25 |
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1.45 |
1.41 |
278.5 |
-1.68 |
-0.43 |
23.4 |
82 |
28 |
19 |
15 |
16 |
4 |
8 |
0 |
DG 26 N DA 27 N
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26 |
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1.20 |
1.20 |
330.1 |
-1.68 |
-0.39 |
23.2 |
85 |
25 |
18 |
15 |
14 |
2 |
3 |
0 |
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27 |
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1.49 |
1.49 |
78.4 |
0.44 |
-0.14 |
7.2 |
84 |
2 |
4 |
3 |
15 |
3 |
2 |
1 |
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28 |
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1.18 |
1.28 |
115.3 |
-0.47 |
-0.39 |
11.7 |
80 |
5 |
5 |
3 |
11 |
3 |
3 |
0 |
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29 |
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1.54 |
1.70 |
26.7 |
0.18 |
-0.31 |
4.7 |
88 |
0 |
2 |
0 |
4 |
2 |
0 |
0 |
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30 |
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1.35 |
1.52 |
32.1 |
-0.36 |
-0.44 |
7.8 |
84 |
0 |
3 |
1 |
2 |
2 |
0 |
0 |
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31 |
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1.76 |
1.82 |
35.2 |
-0.06 |
-0.35 |
6.0 |
82 |
0 |
2 |
1 |
1 |
3 |
0 |
0 |
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32 |
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1.59 |
1.74 |
38.0 |
0.29 |
-0.16 |
6.4 |
86 |
2 |
2 |
3 |
8 |
0 |
1 |
0 |
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33 |
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1.44 |
1.44 |
26.8 |
1.47 |
0.14 |
1.6 |
76 |
0 |
0 |
1 |
12 |
0 |
1 |
0 |
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34 |
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1.78 |
3.01 |
25.7 |
0.93 |
-0.09 |
4.6 |
79 |
0 |
2 |
0 |
7 |
2 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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